Evidence map›Paper›PMID 19707188›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2009

Genotoxic potential of lineage-specific lentivirus vectors carrying the beta-globin locus control region.

Paritha I Arumugam, Tomoyasu Higashimoto, Fabrizia Urbinati, Ute Modlich, Shawna Nestheide, Ping Xia, Catherine Fox, Andrea Corsinotti, Christopher Baum, Punam Malik

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 75 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Gene Therapy for β-Hemoglobinopathies.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Insulated Foamy Viral Vectors.Human gene therapy · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Paritha I ArumugamDivision of Experimental Hematology/Cancer Biology, Cincinnati Children's Research Foundation, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio 45229, USA.
Tomoyasu Higashimoto
Fabrizia Urbinati
Ute Modlich
Shawna Nestheide
Ping Xia
Catherine Fox
Andrea Corsinotti
Christopher Baum
Punam Malik
Cincinnati Children's Hospital Medical Center · USMedizinische Hochschule Hannover · DE

Funding

Transduction of Human Stem and Progenitor CellsP01HL073104 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KOHN, DONALD B · 2003 to 2013
$18.3M
Lentiviral vectors for gene therapy for beta-thalassemiaR01HL070135 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI MALIK, PUNAM · 2002 to 2006
$1.5M
Prevention of insertional mutagenesis in gene therapyR01CA107492 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI BAUM, CHRISTOPHER · 2005 to 2008
$917k
A preclinical large animal model for globin gene transferZ01HL006008 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI TISDALE, JOHN · 2008 to 2008
$330k
Intramural NIH HHS Z01 HL006008NCI NIH HHS 5R01CA107492-02NCI NIH HHS R01 CA107492NHLBI NIH HHS P01 HL073104NHLBI NIH HHS P01HL073104NHLBI NIH HHS R01 HL070135NHLBI NIH HHS R01-HL70135-01NHLBI NIH HHS U54HL06-008
6 · The paper itself

Abstract

Insertional mutagenesis by long terminal repeat (LTR) enhancers in gamma-retrovirus-based vectors (GVs) in clinical trials has prompted deeper investigations into vector genotoxicity. Experimentally, self-inactivating (SIN) lentivirus vectors (LVs) and GV containing internal promoters/enhancers show reduced genotoxicity, although strong ubiquitously-active enhancers dysregulate genes independent of vector type/design. Herein, we explored the genotoxicity of beta-globin (BG) locus control region (LCR), a strong long-range lineage-specific-enhancer, with/without insulator (Ins) elements in LV using primary hematopoietic progenitors to generate in vitro immortalization (IVIM) assay mutants. LCR-containing LV had approximately 200-fold lower transforming potential, compared to the conventional GV. The LCR perturbed expression of few genes in a 300 kilobase (kb) proviral vicinity but no upregulation of genes associated with cancer, including an erythroid-specific transcription factor occurred. A further twofold reduction in transforming activity was observed with insulated LCR-containing LV. Our data indicate that toxicology studies of LCR-containing LV in mice will likely not yield any insertional oncogenesis with the numbers of animals that can be practically studied.

Indexed as

Animalsbeta-GlobinsBone Marrow CellsCells, CulturedGenetic VectorsInsulator ElementsLentivirusLocus Control RegionMiceMice, Inbred C57BLMutagenesis, InsertionalReverse Transcriptase Polymerase Chain ReactionTransduction, Geneticbeta-Globins

Identifiers

PMID19707188
PMCPMC2835044
OpenAlexW2011695731

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.