Evidence map›Paper›PMID 19704023›Full record

ArticleThe Journal of cell biology2009

Crystal structure of the complete integrin alphaVbeta3 ectodomain plus an alpha/beta transmembrane fragment.

Jian-Ping Xiong, Bhuvaneshwari Mahalingham, Jose Luis Alonso, Laura Ann Borrelli, Xianliang Rui, Saurabh Anand, Bradley T Hyman, Thomas Rysiok, Dirk Müller-Pompalla, Simon L Goodman and 1 more

Abstract read
In one paragraph

Article in The Journal of cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Conformational response of αStructure (London, England : 1993) · 2025
    Article
  5. Interaction of integrin αFrontiers in cell and developmental biology · 2025
    Article
  6. BaNDyT: Bayesian Network modeling of molecular Dynamics Trajectories.bioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Human Saposin B Ligand Binding and Presentation to α-Galactosidase A.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Article
  11. Family-wide analysis of integrin structures predicted by AlphaFold2.bioRxiv : the preprint server for biology · 2023
    Article
  12. Article
  13. Review
  14. Use of Ecto-Tagged Integrins to Monitor Integrin Exocytosis and Endocytosis.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  15. Family-wide analysis of integrin structures predicted by AlphaFold2.Computational and structural biotechnology journal · 2023
    Article
  16. INTEGRINS: A BEDSIDE TO BENCH TO BEDSIDE STORY.Transactions of the American Clinical and Climatological Association · 2023
    Article
  17. Review
  18. Article
  19. Review
  20. Analysis of Integrin αInternational journal of molecular sciences · 2022
    Article

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jian-Ping XiongProgram in Leukocyte Biology and Inflammation, Massachusetts General Hospital, Harvard Medical School, Charlestown, MA 02129, USA.
Bhuvaneshwari Mahalingham
Jose Luis Alonso
Laura Ann Borrelli
Xianliang Rui
Saurabh Anand
Bradley T Hyman
Thomas Rysiok
Dirk Müller-Pompalla
Simon L Goodman
M Amin Arnaout

Funding

Structure and Function of beta2 IntegrinR01DK048549 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 1994 to 2016
$6.0M
Structure-function of the Proangiogenic Integrin alphaVbR01HL070219 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2002 to 2006
$2.2M
The Phagocyte MembraneR01DK074447 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI ARNAOUT, M. AMIN · 2005 to 2009
$2.1M
NHLBI NIH HHS HL070219NHLBI NIH HHS R01 HL070219NIDDK NIH HHS DK07447NIDDK NIH HHS R01 DK048549NIDDK NIH HHS R01 DK074447
6 · The paper itself

Abstract

We determined the crystal structure of 1TM-alphaVbeta3, which represents the complete unconstrained ectodomain plus short C-terminal transmembrane stretches of the alphaV and beta3 subunits. 1TM-alphaVbeta3 is more compact and less active in solution when compared with DeltaTM-alphaVbeta3, which lacks the short C-terminal stretches. The structure reveals a bent conformation and defines the alpha-beta interface between IE2 (EGF-like 2) and the thigh domains. Modifying this interface by site-directed mutagenesis leads to robust integrin activation. Fluorescent lifetime imaging microscopy of inactive full-length alphaVbeta3 on live cells yields a donor-membrane acceptor distance, which is consistent with the bent conformation and does not change in the activated integrin. These data are the first direct demonstration of conformational coupling of the integrin leg and head domains, identify the IE2-thigh interface as a critical steric barrier in integrin activation, and suggest that inside-out activation in intact cells may involve conformational changes other than the postulated switch to a genu-linear state.

Indexed as

Protein Structure, TertiaryAmino Acid SequenceCrystallography, X-RayHumansIntegrin alphaVbeta3K562 CellsModels, MolecularMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingProtein SubunitsSequence AlignmentSequence Homology, Amino AcidIntegrin alphaVbeta3Protein Subunits

Identifiers

PMID19704023
PMCPMC2733745

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.