Evidence map›Paper›PMID 19703395›Full record

ArticleCell2009

Transposition into replicating DNA occurs through interaction with the processivity factor.

Adam R Parks, Zaoping Li, Qiaojuan Shi, Roisin M Owens, Moonsoo M Jin, Joseph E Peters

Abstract read
In one paragraph

Article in Cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Phage Mu enlists the β-sliding clamp for late gene transcription.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  13. Cargo Genes of TnmBio · 2021
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Adam R ParksDepartment of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Zaoping Li
Qiaojuan Shi
Roisin M Owens
Moonsoo M Jin
Joseph E Peters

Funding

Tn7 Transpostion into DNA Replication/Repair ComplexesR01GM069508 · NIGMS · CORNELL UNIVERSITY · PI PETERS, JOSEPH E · 2006 to 2010
$1.1M
NIGMS NIH HHS R01 GM069508
6 · The paper itself

Abstract

The bacterial transposon Tn7 directs transposition into actively replicating DNA by a mechanism involving the transposon-encoded protein TnsE. Here we show that TnsE physically and functionally interacts with the processivity factor of the DNA replication machinery in vivo and in vitro. Our work establishes an in vitro TnsABC+E transposition reaction reconstituted from purified proteins and target DNA structures. Using the in vitro reaction we confirm that the processivity factor specifically reorders TnsE-mediated transposition events on target DNAs in a way that matches the bias with active DNA replication in vivo. The TnsE interaction with an essential and conserved component of the replication machinery, and a DNA structure reveals a mechanism by which Tn7, and probably other elements, selects target sites associated with DNA replication.

Indexed as

DNA ReplicationDNA Transposable ElementsAmino Acid SequenceDNA-Binding ProteinsDNA Polymerase IIIEscherichia coliEscherichia coli ProteinsMolecular Sequence DataSequence Alignmentbeta subunit, DNA polymerase IIIDNA-Binding ProteinsDNA Polymerase IIIDNA Transposable ElementsEscherichia coli ProteinsTnsE protein, E coli

Identifiers

PMID19703395
PMCPMC2752310

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.