Evidence map›Paper›PMID 19702906›Full record

ArticleJournal of gastroenterology and hepatology2009

Distribution of Helicobacter pylori cagA, cagE, oipA and vacA in different major ethnic groups in Tehran, Iran.

Hossein Dabiri, Parviz Maleknejad, Yoshio Yamaoka, Mohammad M Feizabadi, Fereshteh Jafari, Maryam Rezadehbashi, Farrokh A Nakhjavani, Akbar Mirsalehian, Mohammad R Zali

Erratum issuedOpen access · greenAbstract readComparative Study
In one paragraph

Article in Journal of gastroenterology and hepatology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 2 pooled it
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 2 syntheses or guidelines pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Biomolecules · 2026
    Review
  5. Article
  6. Virulence of Helicobacter pylori outer membrane proteins: an updated review.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Review
  7. Review
  8. Low Rate ofJournal of clinical and diagnostic research : JCDR · 2017
    Article
  9. Determination ofMedical journal of the Islamic Republic of Iran · 2017
    Article
  10. Prevalence of cytotoxin-associated genes ofGastroenterology and hepatology from bed to bench · 2017
    Article
  11. Article
  12. Helicobacter pylori and gastric cancer: a state of the art review.Gastroenterology and hepatology from bed to bench · 2015
    Review
  13. Article
  14. Milk of livestock as a possible transmission route of Helicobacter pylori infection.Gastroenterology and hepatology from bed to bench · 2015
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Hossein DabiriDepartment of Microbiology, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Parviz Maleknejad
Yoshio Yamaoka
Mohammad M Feizabadi
Fereshteh Jafari
Maryam Rezadehbashi
Farrokh A Nakhjavani
Akbar Mirsalehian
Mohammad R Zali
Tehran University of Medical Sciences · IRShahid Beheshti University · IRBaylor College of Medicine · US

Funding

REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS DK 62 813NIDDK NIH HHS R01 DK062813
6 · The paper itself

Abstract

BACKGROUND AND

aimThere are geographical variations in Helicobacter pylori virulence genes; cagA, cagE, vacA and oipA. The present study compared the distribution of these genotypes in major ethnic groups residing in Tehran, Iran and their association with clinical outcomes.

methodsA total of 124 H. pylori-positive patients living in Tehran were enrolled in this study. The ethnic distribution was 74 Persians, 33 Turks and 17 other ethnics including Kurds, Lurs, Afghanis and Arabs. The presence of the cagA, cagE and oipA genes and vacA alleles (signal [s] and middle [m] region) were determined by polymerase chain reaction (PCR) from H. pylori DNA.

resultsThe cagA-positive status was predominant in all three ethnic groups (e.g. 65% in Persians and 73% in Turks). In contrast, the cagE-positive status was less than half in Persians (47%) and Turks (30%), whereas it was 77% in other ethnicities (P = 0.008). The predominant vacA genotypes were s1 and m1 in all three ethnic groups (e.g. 68% in Persians and 70% in Turks were s1). There was no significant association between cagA and cagE status or vacA genotypes and clinical outcomes. The oipA-positive strains were more common in non-ulcer dyspepsia (NUD) (63%) than in peptic ulcer patients (15%) (P = 0.001) in Persians, but the association was not observed in other ethnic groups.

conclusionThere are some differences in the H. pylori genotypes among the ethnic groups in Iran. However, none of these markers seemed to be clinically helpful in predicting the clinical presentation of a H. pylori infection in Iran.

Indexed as

AdultAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsDNA, BacterialDyspepsiaEthnicityFemaleGastroscopyGenotypeHelicobacter InfectionsHelicobacter pyloriHumansIranMaleMiddle AgedAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinscagA protein, Helicobacter pyloriDNA, BacterialOipA protein, Helicobacter pyloriPicB protein, Helicobacter pyloriVacA protein, Helicobacter pylori

Identifiers

PMID19702906
PMCPMC3128249
OpenAlexW2052613544

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.