Evidence map›Paper›PMID 19699691›Full record

ArticleDNA repair2009

Evidence for a role of FEN1 in maintaining mitochondrial DNA integrity.

Lidza Kalifa, Gisela Beutner, Naina Phadnis, Shey-Shing Sheu, Elaine A Sia

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
  2. CypD Dependent mPTP Opening Is Crucial for Oxidized Mitochondrial DNA Release in Ferroptosis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Mitochondrial DNA Repair in Neurodegenerative Diseases and Ageing.International journal of molecular sciences · 2022
    Review
  9. Mitochondrial DNA Instability in Mammalian Cells.Antioxidants & redox signaling · 2022
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Human mitochondrial nucleases.The FEBS journal · 2017
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Lidza KalifaDepartment of Biology, University of Rochester, NY 14627, United States.
Gisela Beutner
Naina Phadnis
Shey-Shing Sheu
Elaine A Sia
University of Rochester · USUniversity of Rochester Medical Center · US

Funding

MYOCARDIAL CA2+ TRANSPORT AND METABOLISMR01HL033333 · NHLBI · UNIVERSITY OF ROCHESTER · PI SHEU, SHEY-SHING · 1985 to 2010
$2.3M
Genes Involved in Recovery from UV-Induced Mitochondrial DNA DamageF31GM078700 · NIGMS · UNIVERSITY OF ROCHESTER · PI KALIFA, LIDZA · 2007 to 2010
$160k
NHLBI NIH HHS HL-33333NHLBI NIH HHS R01 HL033333NIGMS NIH HHS 1 F31 GM078700NIGMS NIH HHS F31 GM078700
6 · The paper itself

Abstract

Although the nuclear processes responsible for genomic DNA replication and repair are well characterized, the pathways involved in mitochondrial DNA (mtDNA) replication and repair remain unclear. DNA repair has been identified as being particularly important within the mitochondrial compartment due to the organelle's high propensity to accumulate oxidative DNA damage. It has been postulated that continual accumulation of mtDNA damage and subsequent mutagenesis may function in cellular aging. Mitochondrial base excision repair (mtBER) plays a major role in combating mtDNA oxidative damage; however, the proteins involved in mtBER have yet to be fully characterized. It has been established that during nuclear long-patch (LP) BER, FEN1 is responsible for cleavage of 5' flap structures generated during DNA synthesis. Furthermore, removal of 5' flaps has been observed in mitochondrial extracts of mammalian cell lines; yet, the mitochondrial localization of FEN1 has not been clearly demonstrated. In this study, we analyzed the effects of deleting the yeast FEN1 homolog, RAD27, on mtDNA stability in Saccharomyces cerevisiae. Our findings demonstrate that Rad27p/FEN1 is localized in the mitochondrial compartment of both yeast and mice and that Rad27p has a significant role in maintaining mtDNA integrity.

Indexed as

AnimalsDNA, MitochondrialDNA RepairFlap EndonucleasesGene DeletionMaleMiceMicroscopy, FluorescenceProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA, MitochondrialFlap EndonucleasesRAD27 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID19699691
PMCPMC2748167
OpenAlexW2015172033

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.