Evidence map›Paper›PMID 19696740›Full record

ArticleThe EMBO journal2009

Allosteric beta-propeller signalling in TolB and its manipulation by translocating colicins.

Daniel A Bonsor, Oliver Hecht, Mireille Vankemmelbeke, Amit Sharma, Anne Marie Krachler, Nicholas G Housden, Katie J Lilly, Richard James, Geoffrey R Moore, Colin Kleanthous

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 93 citations in OpenAlex.

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  10. Outer Membrane Vesicles: Biogenesis, Functions, and Issues.Microbiology and molecular biology reviews : MMBR · 2022
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  11. Proteome Exploration ofMicrobiology spectrum · 2022
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  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Daniel A BonsorDepartment of Biology, University of York, York, UK.
Oliver Hecht
Mireille Vankemmelbeke
Amit Sharma
Anne Marie Krachler
Nicholas G Housden
Katie J Lilly
Richard James
Geoffrey R Moore
Colin Kleanthous
University of York · GBUniversity of East Anglia · GBUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council BB/C515520/1Wellcome Trust
6 · The paper itself

Abstract

The Tol system is a five-protein assembly parasitized by colicins and bacteriophages that helps stabilize the Gram-negative outer membrane (OM). We show that allosteric signalling through the six-bladed beta-propeller protein TolB is central to Tol function in Escherichia coli and that this is subverted by colicins such as ColE9 to initiate their OM translocation. Protein-protein interactions with the TolB beta-propeller govern two conformational states that are adopted by the distal N-terminal 12 residues of TolB that bind TolA in the inner membrane. ColE9 promotes disorder of this 'TolA box' and recruitment of TolA. In contrast to ColE9, binding of the OM lipoprotein Pal to the same site induces conformational changes that sequester the TolA box to the TolB surface in which it exhibits little or no TolA binding. Our data suggest that Pal is an OFF switch for the Tol assembly, whereas colicins promote an ON state even though mimicking Pal. Comparison of the TolB mechanism to that of vertebrate guanine nucleotide exchange factor RCC1 suggests that allosteric signalling may be more prevalent in beta-propeller proteins than currently realized.

Indexed as

Allosteric SiteCloning, MolecularColicinsCross-Linking ReagentsEscherichia coliEscherichia coli ProteinsModels, MolecularMutagenesis, Site-DirectedPeriplasmic ProteinsPhenotypeProtein BindingProtein ConformationProtein Interaction MappingProtein Structure, TertiaryProtein TransportSignal TransductionColicinsCross-Linking ReagentsEscherichia coli ProteinsPeriplasmic ProteinstolB protein, E coli

Identifiers

PMID19696740
PMCPMC2750012
OpenAlexW2097399082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.