Evidence map›Paper›PMID 19694956›Full record

ArticleMolecular plant pathology2009

Expressed sequence tags from the flower pathogen Claviceps purpurea.

Birgitt Oeser, François Beaussart, Thomas Haarmann, Nicole Lorenz, Eva Nathues, Yvonne Rolke, Jan Scheffer, January Weiner, Paul Tudzynski

Open access · bronzeAbstract read
In one paragraph

Article in Molecular plant pathology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Molecular Mechanisms Underlying theInternational journal of molecular sciences · 2026
    Review
  2. Article
  3. Article
  4. Simple sequence repeat markers that identifyFungal biology and biotechnology · 2016
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Birgitt OeserInstitut für Botanik, Westf. Wilhelms Universität Münster, Schlossgarten 3, D 48149 Münster, Germany. oser@uni-muenster.de
François Beaussart
Thomas Haarmann
Nicole Lorenz
Eva Nathues
Yvonne Rolke
Jan Scheffer
January Weiner
Paul Tudzynski
University of Münster · DEInstitute of Botany · AMABEnzymes (Germany) · DEInstitute for Biodiversity · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SUMMARY The ascomycete Claviceps purpurea (ergot) is a biotrophic flower pathogen of rye and other grasses. The deleterious toxic effects of infected rye seeds on humans and grazing animals have been known since the Middle Ages. To gain further insight into the molecular basis of this disease, we generated about 10 000 expressed sequence tags (ESTs)-about 25% originating from axenic fungal culture and about 75% from tissues collected 6-20 days after infection of rye spikes. The pattern of axenic vs. in planta gene expression was compared. About 200 putative plant genes were identified within the in planta library. A high percentage of these were predicted to function in plant defence against the ergot fungus and other pathogens, for example pathogenesis-related proteins. Potential fungal pathogenicity and virulence genes were found via comparison with the pathogen-host interaction database (PHI-base; http://www.phi-base.org) and with genes known to be highly expressed in the haustoria of the bean rust fungus. Comparative analysis of Claviceps and two other fungal flower pathogens (necrotrophic Fusarium graminearum and biotrophic Ustilago maydis) highlighted similarities and differences in their lifestyles, for example all three fungi have signalling components and cell wall-degrading enzymes in their arsenal. In summary, the analysis of axenic and in planta ESTs yielded a collection of candidate genes to be evaluated for functional roles in this plant-microbe interaction.

Indexed as

Expressed Sequence TagsApoptosisClavicepsFlowersGene Expression Regulation, FungalGene LibraryGenes, FungalGenes, PlantHost-Pathogen InteractionsRNA, MessengerSecaleSequence Homology, Amino AcidRNA, Messenger

Identifiers

PMID19694956
PMCPMC6640482
OpenAlexW1988560683

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.