Evidence map›Paper›PMID 1969383›Full record

ArticleImmunogenetics1990

Organization of a functional chicken class II B gene.

R Zoorob, G Béhar, G Kroemer, C Auffray

Abstract read
PubMed Publisher
In one paragraph

Article in Immunogenetics, 1990. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 105 citations in OpenAlex.

  1. Novel MHCArchives animal breeding · 2023
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  9. MHC class I loci of the Bar-Headed goose (Anser indicus).Genetics and molecular biology · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

R ZoorobInstitut d'Embryologie Cellulaire et Moléculaire du CNRS, Nogent-sur-Marne, France.
G Béhar
G Kroemer
C Auffray
Centre National de la Recherche Scientifique · FRCollège de France · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Five class II (B-L) B genes are encoded in the major histocompatibility complex (MHC) of chickens of the B12 haplotype. We report here the nucleotide sequence of one of these genes, B-LBII, as well as the primary structure of a corresponding cDNA. The organization of B-LBII, its 5' flanking region including the promotor region, and the amino acid sequence of its product are compared to mammalian class II B genes and to the previously described B-LBIII gene, which probably is a pseudogene since no B-LBIII transcript could be identified. The 5' flanking region of B-LBII exhibits homologs of transcription-controlling sequence motifs, namely S, X, X2, and Y boxes, of class II A and B genes of rodents and man. However, the promotor region of B-LBIII lacks an equivalent of the S box, displays two nucleic acid substitutions in the core sequence of the Y box, and exhibits a 16 base pair (bp) deletion upstream of the site of initiation of transcription. Therefore, an aberrant promotor region is likely to account for the pseudogene-like nature of B-LBIII, which displays open-reading frames in all exons. The data obtained with the functional B-LBII gene are in line with our previous interpretation that both genomic organization and tertiary structure of class II beta molecules are remarkably conserved between birds and mammals.

Indexed as

Amino Acid SequenceAnimalsBase SequenceChickensGenomic LibraryHaplotypesHistocompatibility Antigens Class IIMolecular Sequence DataPoly APseudogenesRegulatory Sequences, Nucleic AcidRNA, MessengerHistocompatibility Antigens Class IIIa-like antigens, avianPoly ARNA, Messenger

Identifiers

PMID1969383
OpenAlexW2091370372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.