Evidence map›Paper›PMID 19690184›Full record

SynthesisCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology2009

Genetic variants in XRCC2: new insights into colorectal cancer tumorigenesis.

Karen Curtin, Wei-Yu Lin, Rina George, Mark Katory, Jennifer Shorto, Lisa A Cannon-Albright, Gillian Smith, D Timothy Bishop, Angela Cox, Nicola J Camp and 1 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 5 pooled it
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 5 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. XRCC2 Arg188His polymorphism and colorectal cancer risk: a meta-analysis.The Journal of international medical research · 2021
    Pooled it
  2. Pooled it
  3. Pooled it
  4. The Arg188His polymorphism in the XRCC2 gene and the risk of cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  5. Pooled it
  6. Trial
  7. Trial
  8. Article
  9. Article
  10. Review
  11. XRCC2 Polymorphisms and Environmental Factors Predict High Risk of Colorectal Cancer.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  12. Article
  13. Article
  14. Article
  15. The relationship between five non-synonymous polymorphisms within three XRCC genes and gastric cancer risk in a Han Chinese population.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  16. Analysis ofBiomedical reports · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Karen CurtinGenetic Epidemiology, University of Utah School of Medicine, 391 Chipeta Way Suite D2, Salt Lake City, UT 84108, USA. karen.curtin@hsc.utah.edu
Wei-Yu Lin
Rina George
Mark Katory
Jennifer Shorto
Lisa A Cannon-Albright
Gillian Smith
D Timothy Bishop
Angela Cox
Nicola J Camp
Colorectal Cancer Study Group
Cancer Research UK · GBUniversity of Dundee · GBUniversity of Utah · USUniversity of Leeds · GB

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
GENETIC ANALYSIS TECHNIQUES FOR COMMON CANCERSK07CA098364 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2004 to 2008
$701k
Transferability of Tagging-SNPs across disease status: colon cancer and XRCC2R03CA123550 · NCI · UNIVERSITY OF UTAH · PI CAMP, NICOLA J. · 2006 to 2007
$147k
Cancer Research UK 10589Cancer Research UK A4994Cancer Research UK C588/A4994NCI NIH HHS CA123550NCI NIH HHS CA98364NCI NIH HHS K07 CA098364NCI NIH HHS N01 PC035141NCI NIH HHS N01-PC-35141NCI NIH HHS P30 CA042014NCI NIH HHS R03 CA123550
6 · The paper itself

Abstract

Polymorphisms in DNA double-strand break repair gene XRCC2 may play an important role in colorectal cancer etiology, specifically in disease subtypes. Associations of XRCC2 variants and colorectal cancer were investigated by tumor site and tumor instability status in a four-center collaboration including three U.K. case-control studies (Sheffield, Leeds, and Dundee) and a U.S. case-control study of cases from high-risk Utah pedigrees (total: 1,252 cases and 1,422 controls). The 14 variants studied were tagging single nucleotide polymorphisms (SNP) selected from National Institute of Environmental Health Sciences/HapMap data supplemented with SNPs identified from sequencing of 125 cases chosen to represent multiple colorectal cancer groups (familial, metastatic disease, and tumor subsite). Monte Carlo significance testing using Genie software provided valid meta-analyses of the total resource that includes family-based data. Similar to reports of colorectal cancer and other cancer sites, the rs3218536 R188H allele was not associated with increased risk. However, we observed a novel, highly significant association of a common SNP, rs3218499G>C, with increased risk of rectal tumors (odds ratio, 2.1; 95% confidence interval, 1.3-3.3; P(chi2) = 0.0006) versus controls, with the largest risk found for female rectal cases (odds ratio, 3.1; 95% confidence interval, 1.6-6.1; P(chi2) = 0.0006). This difference was significantly different to that for proximal and distal colon cancers (P(chi2) = 0.02). Our investigation supports a role for XRCC2 in colorectal cancer tumorigenesis, conferring susceptibility to rectal tumors.

Indexed as

AdultAgedAged, 80 and overCase-Control StudiesColorectal NeoplasmsDNA-Binding ProteinsFemaleGenotypeHumansMaleMiddle AgedPolymorphism, GeneticPolymorphism, Single NucleotideRisk FactorsDNA-Binding ProteinsXRCC2 protein, human

Identifiers

PMID19690184
PMCPMC2742634
OpenAlexW2131923400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.