Evidence map›Paper›PMID 19686653›Full record

ArticleBiophysical journal2009

An intersubunit salt bridge near the selectivity filter stabilizes the active state of Kir1.1.

Henry Sackin, Mikheil Nanazashvili, Hui Li, Lawrence G Palmer, D Eric Walters

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  8. Review
  9. Mechanism for selectivity-inactivation coupling in KcsA potassium channels.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Henry SackinDepartment of Physiology and Biophysics, The Chicago Medical School, Rosalind Franklin University, North Chicago, Illinois, USA. henry.sackin@rosalindfranklin.edu
Mikheil Nanazashvili
Hui Li
Lawrence G Palmer
D Eric Walters
Rosalind Franklin University of Medicine and Science · USCornell University · US

Funding

MOLECULAR CLONING OF EPITHELIAL K CHANNELSR01DK046950 · NIDDK · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI SACKIN, HENRY · 1996 to 2017
$5.4M
MEMBRANE PROCESSES MEDIATING NACL TRANSPORTR01DK027847 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI PALMER, LAWRENCE G · 1986 to 2013
$4.8M
Molecular Cloning of Epithelial K ChannelsR56DK046950 · NIDDK · ROSALIND FRANKLIN UNIV OF MEDICINE & SCI · PI SACKIN, HENRY · 2008 to 2008
$231k
NIDDK NIH HHS DK27847NIDDK NIH HHS DK46950NIDDK NIH HHS R01 DK027847NIDDK NIH HHS R01 DK046950NIDDK NIH HHS R56 DK046950
6 · The paper itself

Abstract

ROMK (Kir1.1) potassium channels are closed by internal acidification with a pKa of 6.7 +/- 0.01 in 100 mM external K and a pKa of 7.0 +/- 0.01 in 1 mM external K. Internal acidification in 1 mM K (but not 100 mM K) not only closed the pH gate but also inactivated Kir1.1, such that realkalization did not restore channel activity until high K was returned to the bath. We identified a new putative intersubunit salt bridge (R128-E132-Kir1.1b) in the P-loop of the channel near the selectivity filter that affected the K sensitivity of the inactivation process. Mutation of either R128-Kir1.1b or E132-Kir1.1b caused inactivation in both 1 mM and 100 mM external K during oocyte acidification. However, 300 mM external K (but not 200 mM Na + 100 mM K) protected both E132Q and R128Y from inactivation. External application of a modified honey-bee toxin, tertiapin Q (TPNQ), also protected Kir1.1 from inactivation in 1 mM K and protected E132Q and R128Y from inactivation in 100 mM K, which suggests that TPNQ binding to the outer mouth of the channel stabilizes the active state. Pretreatment of Kir1.1 with external Ba prevented Kir1.1 inactivation, similar to pretreatment with TPNQ. In addition, mutations that disrupted transmembrane helix H-bonding (K61M-Kir1.1b) or stabilized a selectivity filter to helix-pore linkage (V121T-Kir1.1b) also protected both E132Q and R128Y from inactivation in 1 mM K and 100 mM K. Our results are consistent with Kir inactivation arising from conformational changes near the selectivity filter, analogous to C-type inactivation.

Indexed as

AnimalsCell LineIon Channel GatingOocytesPotassium Channels, Inwardly RectifyingProtein SubunitsSaltsXenopus laevisKCNJ1 protein, humanPotassium Channels, Inwardly RectifyingProtein SubunitsSalts

Identifiers

PMID19686653
PMCPMC2726312
OpenAlexW2164282040

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.