Evidence map›Paper›PMID 19686092›Full record

ArticleThe Biochemical journal2009

Functional characterization of the interactions between endosomal adaptor protein APPL1 and the NuRD co-repressor complex.

Magdalena Banach-Orlowska, Iwona Pilecka, Anna Torun, Beata Pyrzynska, Marta Miaczynska

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

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  7. The first mouse mutants of D14Abb1e (Fam208a) show that it is critical for early development.Mammalian genome : official journal of the International Mammalian Genome Society · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Magdalena Banach-OrlowskaInternational Institute of Molecular and Cell Biology, Laboratory of Cell Biology, Ks. Trojdena 4, 02-109 Warsaw, Poland.
Iwona Pilecka
Anna Torun
Beata Pyrzynska
Marta Miaczynska
International Institute of Molecular and Cell Biology · PL

Funding

Howard Hughes Medical InstituteWellcome Trust 076469Wellcome Trust 076469/Z/05/Z
6 · The paper itself

Abstract

Multifunctional adaptor protein APPL1 [adaptor protein containing PH (pleckstrin homology) domain, PTB (phosphotyrosine binding) domain and leucine zipper motif] belongs to a growing group of endocytic proteins which actively participate in various stages of signalling pathways. Owing to its interaction with the small GTPase Rab5, APPL1 localizes predominantly to a subpopulation of early endosomes but is also capable of nucleocytoplasmic shuttling. Among its various binding partners, APPL1 was reported to associate with the nuclear co-repressor complex NuRD (nucleosome remodelling and deacetylase), containing both nucleosome remodelling and HDAC (histone deacetylase) activities, but the biochemical basis or functional relevance of this interaction remained unknown. Here we characterized the binding between APPL1 and NuRD in more detail, identifying HDAC2 as the key NuRD subunit responsible for this association. APPL1 interacts with the NuRD complex containing enzymatically active HDAC2 but not HDAC1 as the only deacetylase. However, the cellular levels of HDAC1 can regulate the extent of APPL1-NuRD interactions, which in turn modulates the nucleocytoplasmic distribution of APPL1. Increased binding of APPL1 to NuRD upon silencing of HDAC1 promotes the nuclear localization of APPL1, whereas HDAC1 overexpression exerts an opposite effect. Moreover, we also uncovered a NuRD-independent interaction of APPL1 with HDAC1. APPL1 overexpression affects the composition of the HDAC1-containing NuRD complex and the expression of HDAC1 target p21WAF1/CIP1. Cumulatively, these data reveal a surprising complexity of APPL1 interactions with HDACs, with functional consequences for the modulation of gene expression. In a broader sense, these results contribute to an emerging theme of endocytic proteins playing alternative roles in the cell nucleus.

Indexed as

Active Transport, Cell NucleusAdaptor Proteins, Signal TransducingCarrier ProteinsCell LineCell NucleusCyclin-Dependent Kinase Inhibitor p21Gene Expression RegulationGene SilencingHistone Deacetylase 1Histone Deacetylase 2Histone DeacetylasesHumansMi-2 Nucleosome Remodeling and Deacetylase ComplexProtein BindingRepressor ProteinsAdaptor Proteins, Signal TransducingAPPL1 protein, humanCarrier ProteinsCDKN1A protein, humanCyclin-Dependent Kinase Inhibitor p21HDAC1 protein, humanHistone Deacetylase 1Histone Deacetylase 2Histone DeacetylasesMi-2 Nucleosome Remodeling and Deacetylase ComplexRepressor Proteins

Identifiers

PMID19686092
PMCPMC2762692
OpenAlexW2137899552

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.