Evidence map›Paper›PMID 19685880›Full record

ArticleJournal of the American Chemical Society2009

G-quadruplex DNA bound by a synthetic ligand is highly dynamic.

Prakrit V Jena, Pravin S Shirude, Burak Okumus, Katta Laxmi-Reddy, Frédéric Godde, Ivan Huc, Shankar Balasubramanian, Taekjip Ha

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Single-Molecule Studies of Telomeres and Telomerase.Annual review of biophysics · 2017
    Review
  8. Article
  9. Single-molecule imaging reveals a common mechanism shared by G-quadruplex-resolving helicases.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  10. Article
  11. Targeting DNA G-quadruplexes with helical small molecules.Chembiochem : a European journal of chemical biology · 2014
    Article
  12. Review
  13. Article
  14. G-quadruplex formation in telomeres enhances POT1/TPP1 protection against RPA binding.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Prakrit V JenaDepartment of Physics, Howard Hughes Medical Institute, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.
Pravin S Shirude
Burak Okumus
Katta Laxmi-Reddy
Frédéric Godde
Ivan Huc
Shankar Balasubramanian
Taekjip Ha

Funding

Single Molecule Study of Helicase MechanismsR01GM065367 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI HA, TAEKJIP · 2002 to 2014
$3.6M
Biotechnology and Biological Sciences Research CouncilHoward Hughes Medical InstituteNIGMS NIH HHS GM065367NIGMS NIH HHS R01 GM065367
6 · The paper itself

Abstract

Using single molecule fluorescence resonance energy transfer, we investigated the interaction between a quadruplex-binding ligand and the human telomeric G-quadruplex. The binding of quinolinecarboxamide macrocycle to telomeric DNA was essentially irreversible and selectively induced and favored one quadruplex conformation. The ligand-quadruplex complex displayed intramolecular dynamics including quadruplex folding and unfolding in the absence of ligand association and dissociation. We report that the G-quadruplex can be stabilized without preventing the intrinsic intramolecular dynamics of telomeric DNA.

Indexed as

G-QuadruplexesAnimalsAvidinBase SequenceBiotinCattleDNAFluorescence Resonance Energy TransferHumansLigandsQuartzTelomereAvidinBiotinDNALigandsneutravidinQuartz

Identifiers

PMID19685880
PMCPMC2737377

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.