Evidence map›Paper›PMID 19685245›Full record

ArticleCurrent genetics2009

Aspergillus nidulans genes encoding reverse transsulfuration enzymes belong to homocysteine regulon.

Marzena Sieńko, Renata Natorff, Sylwia Owczarek, Igor Olewiecki, Andrzej Paszewski

Abstract read
PubMed Publisher
In one paragraph

Article in Current genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. A community-driven reconstruction of theFungal biology and biotechnology · 2018
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Endogenous cross-talk of fungal metabolites.Frontiers in microbiology · 2014
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Marzena SieńkoInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, 5A Pawińskiego Str, 02-106, Warsaw, Poland. marsi@ibb.waw.pl
Renata Natorff
Sylwia Owczarek
Igor Olewiecki
Andrzej Paszewski
Institute of Biochemistry and Biophysics, Polish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Homocysteine is an intermediate in methionine synthesis in Aspergillus nidulans, but it can also be converted to cysteine by the reverse transsulfuration pathway involving cystathionine beta-synthase (CBS) and cystathionine gamma-lyase (CGL). Because homocysteine is toxic to the cell at high concentrations, this pathway also functions as a means of removal of its excess. We found that the transcription of the mecA and mecB genes encoding CBS and CGL was upregulated by excess of homocysteine as well as by shortage of cysteine. Homocysteine induced transcription of both genes when added to the growth medium or overproduced in a regulatory mutant. The derepressing effect of cysteine shortage was observed in some mutants and in the wild-type strain during sulfur starvation. An increase in the level of mecA or mecB transcript roughly parallel with the elevation of the respective enzyme activity. On the basis of the mode of mecA and mecB regulation by homocysteine, these genes may be classified in a group of genes upregulated directly or indirectly by this amino acid. We call this group of genes the "homocysteine regulon".

Indexed as

Genes, FungalAmino Acid SequenceAspergillus nidulansCloning, MolecularCulture MediaCystathionine beta-SynthaseGene Expression Regulation, FungalHomocysteineMolecular Sequence DataSequence Homology, Amino AcidSulfurTranscription, GeneticCulture MediaCystathionine beta-SynthaseHomocysteineSulfur

Identifiers

PMID19685245
OpenAlexW2072821689

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.