Evidence map›Paper›PMID 19684180›Full record

ArticleApplied and environmental microbiology2009

Cell-free Escherichia coli-based system to screen for quorum-sensing molecules interacting with quorum receptor proteins of Streptomyces coelicolor.

Yung-Hun Yang, Tae-Wan Kim, Sung-Hee Park, Kwangwon Lee, Hyung-Yeon Park, Eunjung Song, Hwang-Soo Joo, Yun-Gon Kim, Ji-Sook Hahn, Byung-Gee Kim

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

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  9. Frontiers in pharmacology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Yung-Hun YangSchool of Chemical and Biological Engineering, Seoul National University, Seoul, Republic of Korea. byungkim@snu.ac.kr.
Tae-Wan Kim
Sung-Hee Park
Kwangwon Lee
Hyung-Yeon Park
Eunjung Song
Hwang-Soo Joo
Yun-Gon Kim
Ji-Sook Hahn
Byung-Gee Kim
Seoul National University · KRInha University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quorum sensing (QS) is mediated by small molecules and involved in diverse cellular functions, such as virulence, biofilm formation, secondary metabolism, and cell differentiation. In this study, we developed a rapid and effective screening tool based on a cell-free Escherichia coli-based expression system to identify QS molecules of Streptomyces. The binding of QS molecules to gamma-butyrolactone receptor ScbR was monitored by changes in the expression levels of the green fluorescent protein reporter in E. coli cell extract. Using this assay system, we could successfully confirm SCB1, a gamma-butyrolactone molecule in Streptomyces coelicolor, binding to its known receptor, ScbR. In addition, we have shown that N-hexanoyl-DL-homoserine lactone, one of the QS molecules in many gram-negative bacteria, can regulate ScbR and trigger precocious antibiotic production in S. coelicolor. Our new method can be applied to other strains for which a screening tool for QS molecules has not yet been developed.

Indexed as

Biosensing TechniquesQuorum Sensing4-ButyrolactoneBacterial ProteinsDNA-Binding ProteinsEscherichia coliGreen Fluorescent ProteinsProtein BindingStreptomyces coelicolor4-ButyrolactoneBacterial ProteinsDNA-Binding ProteinsGreen Fluorescent Proteinshomoserine lactoneScbR protein, Streptomyces coelicolor

Identifiers

PMID19684180
PMCPMC2753082
OpenAlexW2112484982

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.