Evidence map›Paper›PMID 19684128›Full record

ArticleJournal of bacteriology2009

A genome-scale proteomic screen identifies a role for DnaK in chaperoning of polar autotransporters in Shigella.

Anuradha Janakiraman, Kathryn R Fixen, Andrew N Gray, Hironori Niki, Marcia B Goldberg

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  3. Toward aInternational journal of molecular sciences · 2023
    Review
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  6. Journal of cell science · 2019
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Anuradha JanakiramanDivision of Infectious Diseases, Massachusetts General Hospital, Cambridge, Massachusetts 02139, USA.
Kathryn R Fixen
Andrew N Gray
Hironori Niki
Marcia B Goldberg
Harvard University · USCity College · USJapan Radioisotope Association · JPMassachusetts General Hospital · US

Funding

MECHANISM AND FUNCTION OF UNIPOLARITY OF SHIGELLA ICSAR01AI035817 · NIAID · YESHIVA UNIVERSITY · PI GOLDBERG, MARCIA B · 1994 to 2009
$3.9M
Characterization of the Molecular Mechanisms of Cell Division In Escherichia coliSC2GM082336 · NIGMS · CITY COLLEGE OF NEW YORK · PI JANAKIRAMAN, ANURADHA · 2009 to 2011
$618k
NIAID NIH HHS AI035817NIAID NIH HHS R01 AI035817NIGMS NIH HHS GM082336NIGMS NIH HHS SC2 GM082336
6 · The paper itself

Abstract

Autotransporters are outer membrane proteins that are widely distributed among gram-negative bacteria. Like other autotransporters, the Shigella autotransporter IcsA, which is required for actin assembly during infection, is secreted at the bacterial pole. In the bacterial cytoplasm, IcsA localizes to poles and potential cell division sites independent of the cell division protein FtsZ. To identify bacterial proteins involved in the targeting of IcsA to the pole in the bacterial cytoplasm, we screened a genome-scale library of Escherichia coli proteins tagged with green fluorescent protein (GFP) for those that displayed a localization pattern similar to that of IcsA-GFP in cells that lack functional FtsZ using a strain carrying a temperature-sensitive ftsZ allele. For each protein that mimicked the localization of IcsA-GFP, we tested whether IcsA localization was dependent on the presence of the protein. Although these approaches did not identify a polar receptor for IcsA, the cytoplasmic chaperone DnaK both mimicked IcsA localization at elevated temperatures as a GFP fusion and was required for the localization of IcsA to the pole in the cytoplasm of E. coli. DnaK was also required for IcsA secretion at the pole in Shigella flexneri. The localization of DnaK-GFP to poles and potential cell division sites was dependent on elevated growth temperature and independent of the presence of IcsA or functional FtsZ; native DnaK was found to be enhanced at midcell and the poles. A second Shigella autotransporter, SepA, also required DnaK for secretion, consistent with a role of DnaK more generally in the chaperoning of autotransporter proteins in the bacterial cytoplasm.

Indexed as

Genome, BacterialBacterial ProteinsDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsGene Expression ProfilingGene Expression Regulation, BacterialHSP70 Heat-Shock ProteinsMolecular ChaperonesProtein TransportProteomicsShigellaTranscription FactorsBacterial ProteinsDNA-Binding ProteinsdnaK protein, E coliEscherichia coli ProteinsHSP70 Heat-Shock ProteinsMolecular ChaperonesTranscription FactorsvirG protein, Shigella flexneri

Identifiers

PMID19684128
PMCPMC2753027
OpenAlexW2072975732

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.