Evidence map›Paper›PMID 19680781›Full record

ArticleMycopathologia2010

Comparison of genotypes between environmental and clinical isolates of Cryptococcus neoformans var. grubii based on microsatellite patterns.

Jian Zhu, Yingqian Kang, Jun Uno, Hideaki Taguchi, Ying Liu, Mihoko Ohata, Reiko Tanaka, Maria Luiza Moretti, Yuzuru Mikami

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Mycopathologia, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. The Predominance of a Specific Genotype ofComputational and mathematical methods in medicine · 2022
    Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jian ZhuMedical Mycology Research Center, Chiba University, Japan 1-8-1 Inohana, Chuo-ku, Chiba, 260-8673, Japan.
Yingqian Kang
Jun Uno
Hideaki Taguchi
Ying Liu
Mihoko Ohata
Reiko Tanaka
Maria Luiza Moretti
Yuzuru Mikami

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We applied multilocus microsatellite typing (MLMT) method to investigate the genetic relation between Cryptococcus neoformans var. grubii clinical and environmental isolates in São Paulo, Brazil. This MLMT method includes three functional gene sequences of C. neoformans var. grubii, which are dispersed on three chromosomes. In all, 89 strains (36 clinical and 53 environmental isolates) were analyzed. Of 36 clinical strains, 20 belonged to a major type of MLMT-13 (55.6%). They were mainly isolated from clinical specimens. About 52.8% of strains from the environment belong to a major type of MLMT-36, which are indigenous to environments and which were not isolated from clinical samples. Thus, we recognized two genotypes that distinguish majority of clinical and environmental strains. No differences were found in antifungal susceptibility and capsule size between major environmental and clinical MLMT types.

Indexed as

Environmental MicrobiologyMicrosatellite RepeatsAnimalsAntifungal AgentsBrazilColumbidaeCryptococcosisCryptococcus neoformansDNA, FungalGenetic VariationGenome, FungalHIVHIV InfectionsHumansMicrobial Sensitivity TestsSequence Analysis, DNAAntifungal AgentsDNA, Fungal

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.