Evidence map›Paper›PMID 19679658›Full record

ArticleThe Journal of biological chemistry2009

Nucleophosmin/B23 regulates ubiquitin dynamics in nucleoli by recruiting deubiquitylating enzyme USP36.

Akinori Endo, Naomi Kitamura, Masayuki Komada

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  15. The ubiquitin-specific protease USP36 is a conserved histone H2B deubiquitinase.Biochemical and biophysical research communications · 2018
    Article
  16. Article
  17. Functional roles of HIV-1 Tat protein in the nucleus.Cellular and molecular life sciences : CMLS · 2016
    Review
  18. Article
  19. The nucleolar ubiquitin-specific protease USP36 deubiquitinates and stabilizes c-Myc.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Akinori EndoDepartment of Biological Sciences, Tokyo Institute of Technology, Yokohama 226-8501, Japan.
Naomi KitamuraDepartment of Biological Sciences, Tokyo Institute of Technology, Yokohama 226-8501, Japan.
Masayuki KomadaDepartment of Biological Sciences, Tokyo Institute of Technology, Yokohama 226-8501, Japan. Electronic address: makomada@bio.titech.ac.jp.
Tokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nucleolus is a subnuclear compartment with multiple cellular functions, including ribosome biogenesis. USP36 is a deubiquitylating enzyme that localizes to nucleoli and plays an essential role in regulating the structure and function of the organelle. However, how the localization of USP36 is regulated remains unknown. Here, we identified a short stretch of basic amino acids (RGKEKKIKKFKREKRR) that resides in the C-terminal region of USP36 and serves as a nucleolar localization signal for the protein. We found that this motif interacts with a central acidic region of nucleophosmin/B23, a major nucleolar protein involved in various nucleolar functions. Knockdown of nucleophosmin/B23 resulted in a significant reduction in the amount of USP36 in nucleoli, without affecting the cellular USP36 level. This was associated with elevated ubiquitylation levels of fibrillarin, a USP36 substrate protein in nucleoli. We conclude that nucleophosmin/B23 recruits USP36 to nucleoli, thereby serving as a platform for the regulation of nucleolar protein functions through ubiquitylation/deubiquitylation.

Indexed as

Amino Acid SequenceAnimalsCell NucleolusChlorocebus aethiopsCOS CellsHeLa CellsHumansMolecular Sequence DataMutagenesis, Site-DirectedNuclear ProteinsNucleophosminRecombinant Fusion ProteinsRNA, Small InterferingUbiquitinUbiquitinationUbiquitin ThiolesteraseNPM1 protein, humanNuclear ProteinsNucleophosminRecombinant Fusion ProteinsRNA, Small InterferingUbiquitinUbiquitin ThiolesteraseUSP36 protein, human

Identifiers

PMID19679658
PMCPMC2788843
OpenAlexW1982671296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.