Evidence map›Paper›PMID 19679642›Full record

ArticleNucleic acids research2009

RNA polymerase III can drive polycistronic expression of functional interfering RNAs designed to resemble microRNAs.

Lindsey L Snyder, Iqbal Ahmed, Laura F Steel

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. MicroRNAs: an emerging science in cancer epigenetics.Journal of clinical bioinformatics · 2013
    Article
  6. Article
  7. Creating a flexible multiple microRNA expression vector by linking precursor microRNAs.Biochemical and biophysical research communications · 2011
    Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Lindsey L SnyderDepartment of Microbiology and Immunology, Institute for Molecular Medicine and Infectious Disease, Drexel University College of Medicine, Philadelphia, PA 19102, USA.
Iqbal Ahmed
Laura F Steel
Drexel University · USInstitute for Molecular Medicine · US

Funding

RNAi Mediated Suppression of Hepatitis B ReplicationU01AI053988 · NIAID · NUCLEONICS, INC. · PI PACHUK, CATHERINE J · 2003 to 2007
$1.5M
NIAID NIH HHS AI053988NIAID NIH HHS U01 AI053988
6 · The paper itself

Abstract

In both research and therapeutic applications of RNA interference, it is often advantageous to silence several targets simultaneously. Toward this end, several groups have developed vectors that utilize the model of endogenously encoded micro (mi) RNAs, where a single RNA polymerase II promoter can drive the expression of multiple interfering RNAs. Stronger pol III promoters have been used to drive individual short hairpin (sh) RNAs, but to date, it has been necessary to repeat the promoter in each silencing cassette to achieve multiplexed expression from a single vector. Here, we show that it is possible to drive polycistronic expression from a single pol III promoter when the interfering RNAs are formatted to resemble miRNAs rather than shRNAs. As many as four miRNAs designed to target hepatitis B virus (HBV) transcripts are shown to be processed and functional in reporter assays as well as in the context of replicating virus in cell culture systems. Although it has been observed that high levels of expression of shRNAs can lead to cytotoxicity, we find no significant evidence in transient transfection assays that the HBV-miRNAs produced by our vectors compete for the activity of endogenously produced miR-122 or for processing of an exogenously expressed miR-EGFP.

Indexed as

RNA InterferenceCell Line, TumorHepatitis B virusHumansMicroRNAsPromoter Regions, GeneticRNA Polymerase IIIRNA, Small InterferingVirus ReplicationMicroRNAsRNA Polymerase IIIRNA, Small Interfering

Identifiers

PMID19679642
PMCPMC2770651
OpenAlexW2157403368

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.