Evidence map›Paper›PMID 19679225›Full record

ArticleAmerican journal of human genetics2009

X chromosomal variation is associated with slow progression to AIDS in HIV-1-infected women.

Roman A Siddiqui, Ulrike Sauermann, Janine Altmüller, Elfriede Fritzer, Michael Nothnagel, Nina Dalibor, Jacques Fellay, Franz-Josef Kaup, Christiane Stahl-Hennig, Peter Nürnberg and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Review
  4. Immunological evaluation of young unvaccinated patients with Turner syndrome after COVID-19.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2023
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  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Observational
  13. Sex-based differences in HIV type 1 pathogenesis.The Journal of infectious diseases · 2014
    Review
  14. Sex influences immune responses to viruses, and efficacy of prophylaxis and treatments for viral diseases.BioEssays : news and reviews in molecular, cellular and developmental biology · 2012
    Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Roman A SiddiquiGenome Analysis, Leibniz Institute for Age Research-Fritz Lipmann Institute, Jena, Germany. rsidd@fli-leibniz.de
Ulrike Sauermann
Janine Altmüller
Elfriede Fritzer
Michael Nothnagel
Nina Dalibor
Jacques Fellay
Franz-Josef Kaup
Christiane Stahl-Hennig
Peter Nürnberg
Michael Krawczak
Matthias Platzer
Christian-Albrechts-Universität zu Kiel · DEGerman Primate Center · DEUniversity of Cologne · DEDuke University · USLeibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AIDS has changed from a mostly male-specific health problem to one that predominantly affects females. Although sex differences in HIV-1 susceptibility are beyond doubt, the extent to which sex affects the onset and progression of AIDS has remained elusive. Here, we provide evidence for an influence of X chromosomal variation on the course of retroviral infection, both in HIV-1-infected patients and in the rhesus macaque model of AIDS. A two-stage, microsatellite-based GWAS of SIV-infected monkeys revealed MHC class I markers and a hitherto-unknown X chromosomal locus as being associated with a nominal score measuring progression to AIDS (Fisher's exact p < 10(-6)). The X chromosomal association was subsequently confirmed in HIV-1-infected patients with published SNP genotype data. SNP rs5968255, located at human Xq21.1 in a conserved sequence element near the RPS6KA6 and CYLC1 genes, was identified as a significant genetic determinant of disease progression in females (ANOVA p = 8.8 x 10(-5)), but not in males (p = 0.19). Heterozygous female carriers of the C allele showed significantly slower CD4 cell decline and a lower viral load at set point than TT homozygous females and than males. Inspection of HapMap revealed that the CT genotype is significantly more frequent among Asians than among Europeans or Africans. Our results suggest that, in addition to the individual innate and adaptive immunity status, sex-linked genetic variation impacts upon the rate of progression to AIDS. Elucidating the mechanisms underlying this sex-specific effect will promote the development of antiretroviral therapies with high efficacy in both sexes.

Indexed as

Acquired Immunodeficiency SyndromeChromosomes, Human, XGenetic VariationHIV-1AllelesDisease ProgressionFemaleGene FrequencyHeterozygoteHIV InfectionsHumansMalePhenotypePolymorphism, Single NucleotideSex Factors

Identifiers

PMID19679225
PMCPMC2725232
OpenAlexW2073973730

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.