Evidence map›Paper›PMID 19675149›Full record

ArticlePlant physiology2009

Plastidial glyceraldehyde-3-phosphate dehydrogenase deficiency leads to altered root development and affects the sugar and amino acid balance in Arabidopsis.

Jesús Muñoz-Bertomeu, Borja Cascales-Miñana, Jose Miguel Mulet, Edurne Baroja-Fernández, Javier Pozueta-Romero, Josef M Kuhn, Juan Segura, Roc Ros

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
11.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 172 citations in OpenAlex.

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  20. TheFrontiers in plant science · 2024
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39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Jesús Muñoz-BertomeuDepartament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46100 Burjassot, Valencia, Spain.
Borja Cascales-Miñana
Jose Miguel Mulet
Edurne Baroja-Fernández
Javier Pozueta-Romero
Josef M Kuhn
Juan Segura
Roc Ros
Agrobiotechnology Institute · ESConsejo Superior de Investigaciones Científicas · ESUniversity of California, San Diego · USInstituto de Biología Molecular y Celular de Plantas · ESUniversitat de València · ES

Funding

STRESS HORMONE SIGNAL TRANSDUCTION IN ARABIDOPSISR01GM060396 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHROEDER, JULIAN I · 2000 to 2023
$7.4M
NIGMS NIH HHS GM060396
6 · The paper itself

Abstract

Glycolysis is a central metabolic pathway that, in plants, occurs in both the cytosol and the plastids. The glycolytic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) catalyzes the conversion of glyceraldehyde-3-phosphate to 1,3-bisphosphoglycerate with concomitant reduction of NAD(+) to NADH. Both cytosolic (GAPCs) and plastidial (GAPCps) GAPDH activities have been described. However, the in vivo functions of the plastidial isoforms remain unresolved. In this work, we have identified two Arabidopsis (Arabidopsis thaliana) chloroplast/plastid-localized GAPDH isoforms (GAPCp1 and GAPCp2). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism, and sterility. In spite of their low gene expression level as compared with other GAPDHs, GAPCp down-regulation leads to altered gene expression and to drastic changes in the sugar and amino acid balance of the plant. We demonstrate that GAPCps are important for the synthesis of serine in roots. Serine supplementation to the growth medium rescues root developmental arrest and restores normal levels of carbohydrates and sugar biosynthetic activities in gapcp double mutants. We provide evidence that the phosphorylated pathway of Ser biosynthesis plays an important role in supplying serine to roots. Overall, these studies provide insights into the in vivo functions of the GAPCps in plants. Our results emphasize the importance of the plastidial glycolytic pathway, and specifically of GAPCps, in plant primary metabolism.

Indexed as

Carbohydrate MetabolismAmino AcidsArabidopsisArabidopsis ProteinsGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenes, PlantGenetic Complementation TestGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)GlycolysisLipid MetabolismMutationPhenotypePhylogenyPlant LeavesPlant RootsAmino AcidsArabidopsis ProteinsGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)RNA, MessengerSerine

Identifiers

PMID19675149
PMCPMC2754643
OpenAlexW2038934471

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.