Evidence map›Paper›PMID 19675128›Full record

ArticleDevelopment (Cambridge, England)2009

Vegetally localized Xenopus trim36 regulates cortical rotation and dorsal axis formation.

Tawny N Cuykendall, Douglas W Houston

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  10. Vertebrate Axial Patterning: From Egg to Asymmetry.Advances in experimental medicine and biology · 2017
    Review
  11. E3 ubiquitin ligase RFWD2 controls lung branching through protein-level regulation of ETV transcription factors.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  12. Article
  13. Review
  14. Article
  15. Article
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  17. Article
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  19. Article
  20. Identification of germ plasm-associated transcripts by microarray analysis of Xenopus vegetal cortex RNA.Developmental dynamics : an official publication of the American Association of Anatomists · 2010
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Tawny N CuykendallThe University of Iowa, Department of Biology, 257 BB, Iowa City, IA 52242, USA.
Douglas W Houston
University of Iowa · US

Funding

Localized mRNAs in vertebrate axis formationR01GM083999 · NIGMS · UNIVERSITY OF IOWA · PI HOUSTON, DOUGLAS W · 2008 to 2016
$2.6M
NIGMS NIH HHS 5R01 GM083999-02NIGMS NIH HHS R01 GM083999
6 · The paper itself

Abstract

Specification of the dorsoventral axis in Xenopus depends on rearrangements of the egg vegetal cortex following fertilization, concomitant with activation of Wnt/beta-catenin signaling. How these processes are tied together is not clear, but RNAs localized to the vegetal cortex during oogenesis are known to be essential. Despite their importance, few vegetally localized RNAs have been examined in detail. In this study, we describe the identification of a novel localized mRNA, trim36, and characterize its function through maternal loss-of-function experiments. We find that trim36 is expressed in the germ plasm and encodes a ubiquitin ligase of the Tripartite motif-containing (Trim) family. Depletion of maternal trim36 using antisense oligonucleotides results in ventralized embryos and reduced organizer gene expression. We show that injection of wnt11 mRNA rescues this effect, suggesting that Trim36 functions upstream of Wnt/beta-catenin activation. We further find that vegetal microtubule polymerization and cortical rotation are disrupted in trim36-depleted embryos, in a manner dependent on Trim36 ubiquitin ligase activity. Additionally, these embryos can be rescued by tipping the eggs 90 degrees relative to the animal-vegetal axis. Taken together, our results suggest a role for Trim36 in controlling the stability of proteins regulating microtubule polymerization during cortical rotation, and subsequently axis formation.

Indexed as

OocytesXenopus laevisAnimalsbeta CateninBiomarkersCarrier ProteinsEmbryo, NonmammalianGene Expression ProfilingGene Expression Regulation, DevelopmentalGravitationIntracellular Signaling Peptides and ProteinsMicrotubulesMorphogenesisRNA, MessengerSignal TransductionTripartite Motif Proteinsbeta CateninBiomarkersCarrier ProteinsIntracellular Signaling Peptides and ProteinsRNA, MessengerTrim36 protein, XenopusTripartite Motif ProteinsUbiquitin-Protein LigasesWnt ProteinsXenopus Proteins

Identifiers

PMID19675128
PMCPMC2730363
OpenAlexW2126855072

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.