Evidence map›Paper›PMID 19674907›Full record

ArticleBioorganic & medicinal chemistry2009

Staurosporine tethered peptide ligands that target cAMP-dependent protein kinase (PKA): optimization and selectivity profiling.

Carolyn D Shomin, Scott C Meyer, Indraneel Ghosh

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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  13. Bivalent inhibitors of protein kinases.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Carolyn D ShominDepartment of Chemistry and Biochemistry, University of Arizona, Tucson, AZ 85721, United States.
Scott C Meyer
Indraneel Ghosh
University of Arizona · US

Funding

Structured Protein Scaffolds for Phage-DisplayR01AI068414 · NIAID · UNIVERSITY OF ARIZONA · PI GHOSH, INDRANEEL · 2006 to 2009
$1.1M
Kinase selective small molecule conjugates as antibody surrogatesR21CA141974 · NCI · UNIVERSITY OF ARIZONA · PI GHOSH, INDRANEEL · 2009 to 2010
$357k
NCI NIH HHS R21 CA141974NCI NIH HHS R21CA141974NIAID NIH HHS R01 AI068414NIAID NIH HHS R01AI068414
6 · The paper itself

Abstract

We have recently developed a fragment based selection strategy for targeting kinases, where a small molecule warhead can be non-covalently tethered to a phage-displayed library of peptides. This approach was applied to the conversion of the promiscuous kinase inhibitor, staurosporine, into a potent bivalent ligand for cAMP-dependent protein kinase (PKA). Herein we report a systematic evaluation of this new bivalent ligand (BL); (a) Lineweaver-Burke analysis revealed that the BL, unlike substrate-based bivalent kinase inhibitors, displayed non-competitive inhibition with respect to the peptide substrate, suggesting an allosteric mechanism of action; (b) linker optimization of the BL, afforded one of the most potent, sub-nanomolar, inhibitors of PKA reported to date; (c) the BL was found to be modular, where attachment of active site targeted small molecule warheads in lieu of staurosporine could achieve similar gains in affinity; and (d) profiling studies of both the staurosporine derivative and the BL (amide isostere) against a panel of 90 kinases revealed almost unique enhancement in selectivity against PKA (>5-fold) compared to the starting staurosporine derivative. These combined results provide new insights for BL discovery, which has the potential to provide guidance toward the development of kinase selective reagents while uncovering new allosteric sites on kinases for therapeutic targeting.

Indexed as

Allosteric SiteCatalytic DomainCyclic AMP-Dependent Protein KinasesHumansKineticsLigandsPeptide LibraryProtein Kinase InhibitorsStaurosporineCyclic AMP-Dependent Protein KinasesLigandsPeptide LibraryProtein Kinase InhibitorsStaurosporine

Identifiers

PMID19674907
PMCPMC2749490
OpenAlexW2138838342

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.