Evidence map›Paper›PMID 19673882›Full record

ArticleBritish journal of haematology2009

A novel association between a SNP in CYBRD1 and serum ferritin levels in a cohort study of HFE hereditary haemochromatosis.

Clare C Constantine, Greg J Anderson, Chris D Vulpe, Christine E McLaren, Melanie Bahlo, Heng Lin Yeap, Dorota M Gertig, Nicholas J Osborne, Nadine A Bertalli, Kenneth B Beckman and 11 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in British journal of haematology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 65 citations in OpenAlex.

  1. Genetic factors associated with iron storage in Australian blood donors.Blood transfusion = Trasfusione del sangue · 2018
    Trial
  2. Article
  3. Ethnic Differences in Iron Status.Advances in nutrition (Bethesda, Md.) · 2021
    Review
  4. Revisiting hemochromatosis: geneticAnnals of translational medicine · 2021
    Review
  5. International journal of molecular sciences · 2021
    Article
  6. Inherited iron overload disorders.Translational gastroenterology and hepatology · 2020
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Haemochromatosis.Nature reviews. Disease primers · 2018
    Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Article
  17. Epistasis in iron metabolism: complex interactions between Cp, Mon1a, and Slc40a1 loci and tissue iron in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 10 institutions in 3 countries.

Clare C ConstantineCentre for MEGA Epidemiology, School of Population Health, University of Melbourne, Carlton, Victoria, Australia.
Greg J Anderson
Chris D Vulpe
Christine E McLaren
Melanie Bahlo
Heng Lin Yeap
Dorota M Gertig
Nicholas J Osborne
Nadine A Bertalli
Kenneth B Beckman
Victoria Chen
Pavel Matak
Andrew T McKie
Martin B Delatycki
John K Olynyk
Dallas R English
Melissa C Southey
Graham G Giles
John L Hopper
Katrina J Allen
Lyle C Gurrin
University of Melbourne · AUKing's College London · GBMurdoch Children's Research Institute · AUCancer Council Victoria · AUQIMR Berghofer Medical Research Institute · AUUniversity of California, Berkeley · USUniversity of California, Irvine · USUniversity of Western Australia · AUVictorian Clinical Genetics Services · AUWalter and Eliza Hall Institute of Medical Research · AU

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Christine Hui · 1994 to 2026
$57.9M
Genetic modifiers of hemochromatosis phenotypeR01DK061885 · NIDDK · UNIVERSITY OF MELBOURNE · PI GERTIG, DOROTA M · 2004 to 2006
$1.1M
NCI NIH HHS P30 CA062203NIDDK NIH HHS 1-RO1-DK061885-01A2NIDDK NIH HHS R01 DK061885
6 · The paper itself

Abstract

There is emerging evidence that there are genetic modifiers of iron indices for HFE gene mutation carriers at risk of hereditary hemochromatosis. A random sample, stratified by HFE genotype, of 863 from a cohort of 31 192 people of northern European descent provided blood samples for genotyping of 476 single nucleotide polymorphisms (SNPs) in 44 genes involved in iron metabolism. Single SNP association testing, using linear regression models adjusted for sex, menopause and HFE genotype, was conducted for four continuously distributed outcomes: serum ferritin (log transformed), transferrin saturation, serum transferrin, and serum iron. The SNP rs884409 in CYBRD1 is a novel modifier specific to HFE C282Y homozygotes. Median unadjusted serum ferritin concentration decreased from 1194 microg/l (N = 27) to 387 microg/l (N = 16) for male C282Y homozygotes and from 357 microg/l (N = 42) to 69 microg/l (N = 12) for females, comparing those with no copies to those with one copy of rs884409. Functional testing of this CYBRD1 promoter polymorphism using a heterologous expression assay resulted in a 30% decrease in basal promoter activity relative to the common genotype (P = 0.004). This putative genetic modifier of iron overload expression accounts for 11% (95% CI 0.4%, 22.6%) of the variance in serum ferritin levels of C282Y homozygotes.

Indexed as

Polymorphism, Single NucleotideAdultAgedCytochrome b GroupFemaleFerritinsGene FrequencyGenetic Predisposition to DiseaseGenotypeHemochromatosisHemochromatosis ProteinHistocompatibility Antigens Class IHomozygoteHumansIronMaleCYBRD1 protein, humanCytochrome b GroupFerritinsHemochromatosis ProteinHFE protein, humanHistocompatibility Antigens Class IIronMembrane ProteinsOxidoreductasesTransferrin

Identifiers

PMID19673882
PMCPMC2767327
OpenAlexW2144158223

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.