Evidence map›Paper›PMID 19668196›Full record

ArticleNature cell biology2009

Organizer restriction through modulation of Bozozok stability by the E3 ubiquitin ligase Lnx-like.

Hyunju Ro, Igor B Dawid

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. Impaired Blastocyst Formation inInternational journal of molecular sciences · 2023
    Article
  2. Review
  3. BMP Signaling: Lighting up the Way for Embryonic Dorsoventral Patterning.Frontiers in cell and developmental biology · 2021
    Review
  4. Review
  5. The lateral plate mesoderm.Development (Cambridge, England) · 2020
    Review
  6. TGF-β Family Signaling in Early Vertebrate Development.Cold Spring Harbor perspectives in biology · 2018
    Review
  7. Review
  8. Article
  9. Article
  10. Molecular specification of germ layers in vertebrate embryos.Cellular and molecular life sciences : CMLS · 2016
    Review
  11. Lnx2 ubiquitin ligase is essential for exocrine cell differentiation in the early zebrafish pancreas.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Molecular evolution of the LNX gene family.BMC evolutionary biology · 2011
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Hyunju RoEunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD 20892-2425, USA.
Igor B Dawid
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USNational Institutes of Health · US

Funding

Developmental Genetics in the Zebrafish Danio rerioZIAHD008809 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DAWID, IGOR B · 2009 to 2016
$7.8M
Gene Expression During Embryonic Development Of Xenopus LaevisZIAHD001002 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DAWID, IGOR B · 2009 to 2016
$3.0M
Developmental Genetics in the Zebrafish Danio rerioZ01HD008809 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI DAWID, IGOR B · 2007 to 2008
$2.4M
Intramural NIH HHS Z01 HD008809
6 · The paper itself

Abstract

The organizer anchors the primary embryonic axis, and balance between dorsal (organizer) and ventral domains is fundamental to body patterning. LNX (ligand of Numb protein-X) is a RING finger and four PDZ domain-containing E3 ubiquitin ligase. LNX serves as a binding platform and may have a role in cell fate determination, but its in vivo functions are unknown. Here we show that Lnx-l (Lnx-like) functions as a critical regulator of dorso-ventral axis formation in zebrafish. Depletion of Lnx-l using specific antisense morpholinos (MOs) caused strong embryonic dorsalization. We identified Bozozok (Boz, also known as Dharma or Nieuwkoid) as a binding partner and substrate of Lnx-l. Boz is a homeodomain-containing transcriptional repressor induced by canonical Wnt signalling that is critical for dorsal organizer formation. Lnx-l induced K48-linked polyubiquitylation of Boz, leading to its proteasomal degradation in human 293T cells and in zebrafish embryos. Dorsalization induced by Boz overexpression was suppressed by raising the level of Lnx-l, but Lnx-l failed to counteract dorsalization caused by mutant Boz lacking a critical motif for Lnx-l binding. Furthermore, dorsalization induced by depletion of Lnx-l was alleviated by attenuation of Boz expression. We conclude that Lnx-l modulates Boz activity to prevent the invasion of ventral regions of the embryo by organizer tissue. These studies introduce a ubiquitin ligase, Lnx-l, as a balancing modulator of axial patterning in the zebrafish embryo.

Indexed as

AnimalsBody PatterningCell LineGoosecoid ProteinHomeodomain ProteinsHumansOligonucleotides, AntisenseOrganizers, EmbryonicPolyubiquitinProtein BindingProtein StabilityUbiquitinationUbiquitin-Protein LigasesZebrafishZebrafish Proteinsdharma protein, zebrafishGoosecoid Proteingsc protein, zebrafishHomeodomain ProteinsLnx1 protein, zebrafishOligonucleotides, AntisensePolyubiquitinUbiquitin-Protein LigasesZebrafish Proteins

Identifiers

PMID19668196
PMCPMC2759713
OpenAlexW1987048180

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.