Evidence map›Paper›PMID 19667184›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

Organization of the autoantibody repertoire in healthy newborns and adults revealed by system level informatics of antigen microarray data.

Asaf Madi, Inbal Hecht, Sharron Bransburg-Zabary, Yifat Merbl, Adi Pick, Merav Zucker-Toledano, Francisco J Quintana, Alfred I Tauber, Irun R Cohen, Eshel Ben-Jacob

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 94 citations in OpenAlex.

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  13. Natural antibodies - facts known and unknown.Central-European journal of immunology · 2018
    Review
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  18. Antibody repertoire profiling with mimotope arrays.Human vaccines & immunotherapeutics · 2017
    Article
  19. AAgAtlas 1.0: a human autoantigen database.Nucleic acids research · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Asaf MadiThe Sackler School of Medicine and The Sackler School of Physics and Astronomy, Tel Aviv University, Tel Aviv 69978, Israel.
Inbal Hecht
Sharron Bransburg-Zabary
Yifat Merbl
Adi Pick
Merav Zucker-Toledano
Francisco J Quintana
Alfred I Tauber
Irun R Cohen
Eshel Ben-Jacob
Arthur M. Sackler Gallery · USWeizmann Institute of Science · ILCenter for Theoretical Biological Physics · USBoston University · USTel Aviv University · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The immune system is essential to body defense and maintenance. Specific antibodies to foreign invaders function in body defense, and it has been suggested that autoantibodies binding to self molecules are important in body maintenance. Recently, the autoantibody repertoires in the bloods of healthy mothers and their newborns were studied using an antigen microarray containing hundreds of self molecules. It was found that the mothers expressed diverse repertoires for both IgG and IgM autoantibodies. Each newborn shares with its mother a similar repertoire of IgG antibodies, which cross the placental but its IgM repertoire is more similar to those of other newborns. Here, we took a system-level approach and analyzed the correlations between autoantibody reactivities of the previous data and extended the study to new data from newborns at birth and a week later, and from healthy young women. For the young women, we found modular organization of both IgG and IgM isotypes into antigen cliques-subgroups of highly correlated antigen reactivities. In contrast, the newborns were found to share a universal congenital IgM profile with no modular organization. Moreover, the IgG autoantibodies of the newborns manifested buds of the mothers' antigen cliques, but they were noticeably less structured. These findings suggest that the natural autoantibody repertoire of humans shows relatively little organization at birth, but, by young adulthood, it becomes sorted out into a modular organization of subgroups (cliques) of correlated antigens. These features revealed by antigen microarrays can be used to define personal states of autoantibody organizational motifs.

Indexed as

AdultAlgorithmsAutoantibodiesAutoantigensAutoimmune DiseasesAutoimmunityCluster AnalysisFemaleHumansImmunoglobulin GImmunoglobulin MImmunoglobulinsInfant, NewbornInformaticsMaternal-Fetal ExchangeMicroarray AnalysisAutoantibodiesAutoantigensImmunoglobulin GImmunoglobulin MImmunoglobulins

Identifiers

PMID19667184
PMCPMC2732819
OpenAlexW2022953233

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.