Evidence map›Paper›PMID 19667134›Full record

ArticleGenetics2009

Effects of chromosomal rearrangements on transvection at the yellow gene of Drosophila melanogaster.

Sharon A Ou, Elaine Chang, Szexian Lee, Katherine So, C-ting Wu, James R Morris

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Modeling homologous chromosome recognition via nonspecific interactions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Long-Range Chromatin Interactions.Cold Spring Harbor perspectives in biology · 2015
    Review
  8. Article
  9. Article
  10. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Sharon A OuDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.
Elaine Chang
Szexian Lee
Katherine So
C-ting Wu
James R Morris
Brandeis University · USHarvard University · US

Funding

Transvection and somatic homolog pairing in DrosophilaR01GM085169 · NIGMS · HARVARD MEDICAL SCHOOL · PI WU, CHAO-TING · 2009 to 2012
$2.1M
A STUDY OF TRANSVECTION AT THE DROSOPHILA YELLOW GENER01GM061936 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WU, CHAO-TING · 2000 to 2003
$1.7M
NIGMS NIH HHS GM085169NIGMS NIH HHS GM61936NIGMS NIH HHS R01 GM061936NIGMS NIH HHS R01 GM085169
6 · The paper itself

Abstract

Homologous chromosomes are paired in somatic cells of Drosophila melanogaster. This pairing can lead to transvection, which is a process by which the proximity of homologous genes can lead to a change in gene expression. At the yellow gene, transvection is the basis for several examples of intragenic complementation involving the enhancers of one allele acting in trans on the promoter of a paired second allele. Using complementation as our assay, we explored the chromosomal requirements for pairing and transvection at yellow. Following a protocol established by Ed Lewis, we generated and characterized chromosomal rearrangements to define a region in cis to yellow that must remain intact for complementation to occur. Our data indicate that homolog pairing at yellow is efficient, as complementation was disrupted only in the presence of chromosomal rearrangements that break<or=650 kbp from yellow. We also found that three telomerically placed chromosomal duplications, containing approximately 700 or more kbp of the yellow genomic region, are able to alter complementation at yellow, presumably through competitive pairing interactions. These results provide a formal demonstration of the pairing-dependent nature of yellow transvection and suggest that yellow pairing, as measured by transvection, reflects the extent of contiguous homology flanking the locus.

Indexed as

AnimalsChromosome AberrationsChromosomesDrosophila melanogasterDrosophila ProteinsFemaleGene DuplicationGene Expression RegulationGenetic Complementation TestMaleModels, GeneticMutationTranslocation, GeneticDrosophila Proteinsy protein, Drosophila

Identifiers

PMID19667134
PMCPMC2766311
OpenAlexW2105907188

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.