Evidence map›Paper›PMID 19667096›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2009

Activation-induced cytidine deaminase expression and activity in the absence of germinal centers: insights into hyper-IgM syndrome.

Masayuki Kuraoka, Dongmei Liao, Kaiyong Yang, Sallie D Allgood, Marc C Levesque, Garnett Kelsoe, Yoshihiro Ueda

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 50 citations in OpenAlex.

  1. The mechanisms of human lymphoid chromosomal translocations and their medical relevance.Critical reviews in biochemistry and molecular biology · 2022
    Article
  2. Review
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  5. Review
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  7. An Unmutated IgM Response to the Vi Polysaccharide ofJournal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  8. Review
  9. Article
  10. Review
  11. Efficient Culture of Human Naive and Memory B Cells for Use as APCs.Journal of immunology (Baltimore, Md. : 1950) · 2016
    Article
  12. Review
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Masayuki KuraokaDepartment of Immunology, Duke University, Durham, NC 27710, USA.
Dongmei Liao
Kaiyong Yang
Sallie D Allgood
Marc C Levesque
Garnett Kelsoe
Yoshihiro Ueda
Duke University · US

Funding

Supplement - Inflammatory Triggers in B Cell AutoimmunityU19AI056363 · NIAID · DUKE UNIVERSITY · PI ST. CLAIR, EUGENE WILLIAM · 2003 to 2017
$35.3M
MURINE ANTIBODY REPERTOIRER01AI024335 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI KELSOE, GARNETT H · 1988 to 2010
$2.7M
Human TNFa-Induced Pre-B Cell Bone Marrow EmigrantsR21AI066106 · NIAID · DUKE UNIVERSITY · PI LEVESQUE, MARC C. · 2006 to 2007
$422k
NIAID NIH HHS AI024335NIAID NIH HHS AI056363NIAID NIH HHS AI066106NIAID NIH HHS R01 AI024335NIAID NIH HHS R21 AI066106NIAID NIH HHS U19 AI056363
6 · The paper itself

Abstract

Somatic hypermutation normally occurs as a consequence of the expression of activation-induced cytidine deaminase (AID) by Ag-activated, mature B cells during T cell-dependent germinal center responses. Nonetheless, despite their inability to express CD154 and initiate GC responses, patients with type 1 hyper-IgM syndrome (HIGM1) support populations of IgM(+)IgD(+)CD27(+) B cells that express mutated Ig genes. The origin of these mutated B cells is unknown; the IgM(+)IgD(+)CD27(+) cells do not express AID and appear to acquire mutations independent of stringent selection by Ag. Here, we demonstrate that immature/transitional 1 B cells from the bone marrow of CD154-deficient mice express AID and acquire Ig mutations that lack the hallmarks of antigenic selection via BCR signaling. Comparable levels of AID expression was found in developmentally immature B cells recovered from murine fetal liver and from human immature/transitional 1 B cells recovered from umbilical cord blood. AID expression in human fetal liver was also robust, approaching that of human tonsil tissue and the human germinal center B cell line, Ramos. These observations led us to conclude that AID expression in developing human B cells is the origin of the mutated IgM(+)IgD(+)CD27(+) B cells present in HIGM1 patients, and we propose that both mice and humans share a latent, AID-dependent pathway for the preimmune diversification of B lymphocytes that is more prominent in chicken, sheep, and rabbits.

Indexed as

AICDA (Activation-Induced Cytidine Deaminase)AnimalsB-Lymphocyte SubsetsBone Marrow CellsCell Line, TransformedCell Line, TumorCytidine DeaminaseFemaleGene Expression Regulation, DevelopmentalGene Rearrangement, B-LymphocyteGerminal CenterHumansHyper-IgM Immunodeficiency SyndromeImmunophenotypingLymphocyte ActivationMiceAICDA (Activation-Induced Cytidine Deaminase)Cytidine DeaminaseReceptors, Antigen, B-Cell

Identifiers

PMID19667096
PMCPMC2779701
OpenAlexW2130618713

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.