Evidence map›Paper›PMID 19666534›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2009

The evolutionary origins of beneficial alleles during the repeated adaptation of garter snakes to deadly prey.

Chris R Feldman, Edmund D Brodie, Edmund D Brodie, Michael E Pfrender

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 136 citations in OpenAlex.

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  8. Convergent evolution of toxin resistance in animals.Biological reviews of the Cambridge Philosophical Society · 2022
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  20. Phenotypes in phylogeography: Species' traits, environmental variation, and vertebrate diversification.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chris R FeldmanDepartment of Biology, Utah State University, Logan, UT 84322-5305, USA. ophis@cabnr.unr.edu
Edmund D Brodie
Edmund D Brodie
Michael E Pfrender
Utah State University · USUniversity of Virginia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Where do the genetic variants underlying adaptive change come from? Are currently adaptive alleles recruited by selection from standing genetic variation within populations, moved through introgression from other populations, or do they arise as novel mutations? Here, we examine the molecular basis of repeated adaptation to the toxin of deadly prey in 3 species of garter snakes (Thamnophis) to determine whether adaptation has evolved through novel mutations, sieving of existing variation, or transmission of beneficial alleles across species. Functional amino acid substitutions in the skeletal muscle sodium channel (Na(v)1.4) are largely responsible for the physiological resistance of garter snakes to tetrodotoxin found in their newt (Taricha) prey. Phylogenetic analyses reject the hypotheses that the unique resistance alleles observed in multiple Thamnophis species were present before the split of these lineages, or that alleles were shared among species through occasional hybridization events. Our results demonstrate that adaptive evolution has occurred independently multiple times in garter snakes via the de novo acquisition of beneficial mutations.

Indexed as

AllelesEvolution, MolecularAdaptation, PhysiologicalAnimalsColubridaeGeographyModels, GeneticMolecular Sequence DataMuscle, SkeletalPredatory BehaviorSodium ChannelsTetrodotoxinSodium ChannelsTetrodotoxin

Identifiers

PMID19666534
PMCPMC2726340
OpenAlexW2160019883

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.