Evidence map›Paper›PMID 19661462›Full record

ArticleCirculation research2009

Using lidocaine and benzocaine to link sodium channel molecular conformations to state-dependent antiarrhythmic drug affinity.

Dorothy A Hanck, Elena Nikitina, Megan M McNulty, Harry A Fozzard, Gregory M Lipkind, Michael F Sheets

Abstract read
In one paragraph

Article in Circulation research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 68 citations in OpenAlex.

  1. Trial
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  4. Molecular Pharmacology of Selective NaACS chemical neuroscience · 2024
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  12. Modeling the human NaDrug design, development and therapy · 2017
    Article
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  16. Harry A. Fozzard, MD: 1931–2014.Circulation research · 2015
    Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Dorothy A HanckCardiology (MC6094), University of Chicago, 5841 S Maryland Ave, Chicago, IL 60637, USA. dhanck@uchicago.edu
Elena Nikitina
Megan M McNulty
Harry A Fozzard
Gregory M Lipkind
Michael F Sheets
University of Chicago · US

Funding

Training in Mechanisms of Cardiovascular DiseasesT32HL072742 · NHLBI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI TOBACMAN, LARRY S · 2003 to 2013
$3.7M
STRUCTURE-FUNCTION OF THE CARDIAC SODIUM CHANNELR01HL065661 · NHLBI · UNIVERSITY OF CHICAGO · PI HANCK, DOROTHY A. · 2000 to 2008
$2.8M
PHARMACOLOGY OF CARDIAC SODIUM CHANNEL MODIFIERSR01HL044630 · NHLBI · UNIVERSITY OF UTAH · PI SHEETS, MICHAEL F · 1996 to 2008
$2.7M
NHLBI NIH HHS HL-065661NHLBI NIH HHS HL-R01-044630NHLBI NIH HHS R01 HL044630NHLBI NIH HHS R01 HL065661NHLBI NIH HHS T32 HL072742NHLBI NIH HHS T32HL072742
6 · The paper itself

Abstract

rationaleLidocaine and other antiarrhythmic drugs bind in the inner pore of voltage-gated Na channels and affect gating use-dependently. A phenylalanine in domain IV, S6 (Phe1759 in Na(V)1.5), modeled to face the inner pore just below the selectivity filter, is critical in use-dependent drug block.

objectiveMeasurement of gating currents and concentration-dependent availability curves to determine the role of Phe1759 in coupling of drug binding to the gating changes. METHODS AND

resultsThe measurements showed that replacement of Phe1759 with a nonaromatic residue permits clear separation of action of lidocaine and benzocaine into 2 components that can be related to channel conformations. One component represents the drug acting as a voltage-independent, low-affinity blocker of closed channels (designated as lipophilic block), and the second represents high-affinity, voltage-dependent block of open/inactivated channels linked to stabilization of the S4s in domains III and IV (designated as voltage-sensor inhibition) by Phe1759. A homology model for how lidocaine and benzocaine bind in the closed and open/inactivated channel conformation is proposed.

conclusionsThese 2 components, lipophilic block and voltage-sensor inhibition, can explain the differences in estimates between tonic and open-state/inactivated-state affinities, and they identify how differences in affinity for the 2 binding conformations can control use-dependence, the hallmark of successful antiarrhythmic drugs.

Indexed as

Anti-Arrhythmia AgentsBenzocaineBinding SitesCell LineDose-Response Relationship, DrugHumansIon Channel GatingLidocaineMembrane PotentialsModels, MolecularMolecular StructureMuscle ProteinsNAV1.5 Voltage-Gated Sodium ChannelPhenylalanineProtein ConformationProtein Structure, TertiaryAnti-Arrhythmia AgentsBenzocaineLidocaineMuscle ProteinsNAV1.5 Voltage-Gated Sodium ChannelPhenylalanineSCN5A protein, humanSodium Channels

Identifiers

PMID19661462
PMCPMC2735213
OpenAlexW2130826801

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.