Evidence map›Paper›PMID 19661435›Full record

ArticleScience (New York, N.Y.)2009

An alternative DNA structure is necessary for pilin antigenic variation in Neisseria gonorrhoeae.

Laty A Cahoon, H Steven Seifert

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 171 papers.

0numbers the graph read from it
0cells of the map it votes in
171citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

171 citing papers in PubMed.

  1. Article
  2. Restriction-modification systems are required forProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Restriction-modification systems are required forbioRxiv : the preprint server for biology · 2026
    Article
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  15. Combating multidrug-resistance inNAR molecular medicine · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

111 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Laty A CahoonNorthwestern University Feinberg School of Medicine, 303 East Chicago Avenue, Chicago, IL 60611, USA.
H Steven Seifert

Funding

CELLULAR &MOLECULAR BASIS OF DISEASE TRAINING PROGRAMT32GM008061 · NIGMS · NORTHWESTERN UNIVERSITY · PI CARTHEW, RICHARD W. · 1985 to 2022
$17.1M
Mechanisms of Gonococcal Pilin Antigenic/Phase VariationR37AI033493 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Hank S. SEIFERT · 2003 to 2026
$10.1M
Molecular Genetics of the GonococcusR01AI044239 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SEIFERT, HANK S. · 1999 to 2014
$4.0M
Gonococcal Pilus Structure and FunctionR01AI055977 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI SEIFERT, HANK S. · 2004 to 2008
$1.4M
NIAID NIH HHS R01 AI044239NIAID NIH HHS R01AI044239NIAID NIH HHS R01 AI055977NIAID NIH HHS R01AI055977NIAID NIH HHS R37 AI033493NIAID NIH HHS R37AI033493NIGMS NIH HHS T32 GM008061NIGMS NIH HHS T32GM08061
6 · The paper itself

Abstract

Pathogens can use DNA recombination to promote antigenic variation (Av) of surface structures to avoid immune detection. We identified a cis-acting DNA sequence near the antigenically variable pilin locus of the human pathogen, Neisseria gonorrhoeae. This 16-base pair guanine (G)-rich sequence was required for pilin Av and formed a guanine quartet (G4) structure in vitro. Individual mutations that disrupted the structure also blocked pilin Av and prevented nicks required for recombination from occurring within the G4 region. A compound that binds and stabilizes G4 structures also inhibited pilin Av and prevented nicks from occurring on the G-rich strand. This site constitutes a recombination initiation sequence/structure that directs gene conversion to a specific chromosomal locus.

Indexed as

Antigenic VariationBase PairingBase SequenceDNA, BacterialDNA DamageFimbriae, BacterialFimbriae ProteinsGene ConversionGuanineMesoporphyrinsNeisseria gonorrhoeaeOligodeoxyribonucleotidesRecombination, GeneticDNA, BacterialFimbriae ProteinsGuaninemesoporphyrin IXMesoporphyrinsOligodeoxyribonucleotidespilE protein, Neisseria gonorrhoeae

Identifiers

PMID19661435
PMCPMC2803317

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.