Evidence map›Paper›PMID 19657370›Full record

ArticleGene therapy2009

Retroviral vector integration in post-transplant hematopoiesis in mice conditioned with either submyeloablative or ablative irradiation.

M A Sadat, S Dirscherl, L Sastry, J Dantzer, N Pech, S Griffin, T Hawkins, Y Zhao, C N Barese, S Cross and 9 more

Open access · greenAbstract readComparative StudyEvaluation Study
In one paragraph

Article in Gene therapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Identifying viral integration sites using SeqMap 2.0.Bioinformatics (Oxford, England) · 2011
    Article
  9. Gene therapy of chronic granulomatous disease: the engraftment dilemma.Molecular therapy : the journal of the American Society of Gene Therapy · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 2 countries.

M A SadatDepartment of Pediatrics, Herman B Wells Center for Pediatric Research, Riley Hospital for Children, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
S Dirscherl
L Sastry
J Dantzer
N Pech
S Griffin
T Hawkins
Y Zhao
C N Barese
S Cross
A Orazi
C An
W S Goebel
M C Yoder
X Li
M Grez
K Cornetta
S D Mooney
M C Dinauer
Indiana University – Purdue University Indianapolis · USIndiana University School of MedicineRiley Hospital for Children · USGeorg Speyer Haus · DE

Funding

VectorP01HL053586 · NHLBI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI CORNETTA, KENNETH · 1995 to 2009
$16.0M
BASIC SCIENCE STUDIES ON GENE THERAPY OF BLOOD DISEASEST32HL007910 · NHLBI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI Roland W. Herzog, Reuben Kapur · 1999 to 2026
$7.6M
Cancer Biology Training ProgramT32CA111198 · NCI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI NAKSHATRI, HARIKRISHNA · 2005 to 2009
$1.8M
Discovery of Cis-regulatory Modules in Human GenomeR01HG004359 · NHGRI · UNIVERSITY OF CENTRAL FLORIDA · PI LI, XIAOMAN · 2007 to 2009
$864k
Factors Influencing Engraftment in Submyeloablated HostsK08HL075253 · NHLBI · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI GOEBEL, WILLIAM SCOTT · 2005 to 2009
$667k
Bioinformatics approaches to characterizing amino acid function.K22LM009135 · NLM · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI MOONEY, SEAN DAVID · 2006 to 2008
$465k
NCI NIH HHS T32 CA111198NHGRI NIH HHS R01 HG004359NHLBI NIH HHS K08 HL075253NHLBI NIH HHS P01 HL053586NHLBI NIH HHS P01 HL53586NHLBI NIH HHS T32 HL007910NLM NIH HHS K22 LM009135
6 · The paper itself

Abstract

X-linked chronic granulomatous disease (X-CGD) is an inherited immunodeficiency with absent phagocyte NADPH-oxidase activity caused by defects in the gene-encoding gp91(phox). Here, we evaluated strategies for less intensive conditioning for gene therapy of genetic blood disorders without selective advantage for gene correction, such as might be used in a human X-CGD protocol. We compared submyeloablative with ablative irradiation as conditioning in murine X-CGD, examining engraftment, oxidase activity and vector integration in mice transplanted with marrow transduced with a gamma-retroviral vector for gp91(phox) expression. The frequency of oxidase-positive neutrophils in the donor population was unexpectedly higher in many 300 cGy-conditioned mice compared with lethally irradiated recipients, as was the fraction of vector-marked donor secondary CFU-S12. Vector integration sites in marrow, spleen and secondary CFU-S12 DNA from primary recipients were enriched for cancer-associated genes, including Evi1, and integrations in or near cancer-associated genes were more frequent in marrow and secondary CFU-S12 from 300 cGy-conditioned mice compared with fully ablated mice. These findings support the concept that vector integration can confer a selection bias, and suggest that the intensity of the conditioning regimen may further influence the effects of vector integration on clonal selection in post-transplant engraftment and hematopoiesis.

Indexed as

Genetic VectorsGene Transfer TechniquesHematopoiesisAnimalsBone MarrowFemaleGranulomatous Disease, ChronicHematopoietic Stem Cell TransplantationMaleMembrane GlycoproteinsMiceMice, Inbred C57BLNADPH Oxidase 2NADPH OxidasesNeoplasmsNeutrophilsCybb protein, ratMembrane GlycoproteinsNADPH Oxidase 2NADPH Oxidases

Identifiers

PMID19657370
PMCPMC2795029
OpenAlexW2089367249

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.