Evidence map›Paper›PMID 19656907›Full record

ArticlePlant physiology2009

MERE1, a low-copy-number copia-type retroelement in Medicago truncatula active during tissue culture.

Alexandra Rakocevic, Samuel Mondy, Leïla Tirichine, Viviane Cosson, Lysiane Brocard, Anelia Iantcheva, Anne Cayrel, Benjamin Devier, Ghada Ahmed Abu El-Heba, Pascal Ratet

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 55 citations in OpenAlex.

  1. Article
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  5. Review
  6. Article
  7. Frontiers in plant science · 2016
    Review
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  10. Article
  11. Article
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  13. Article
  14. Conserved genetic determinant of motor organ identity in Medicago truncatula and related legumes.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Alexandra RakocevicInstitut des Sciences du Végétal, CNRS, 91198 Gif sur Yvette, France.
Samuel Mondy
Leïla Tirichine
Viviane Cosson
Lysiane Brocard
Anelia Iantcheva
Anne Cayrel
Benjamin Devier
Ghada Ahmed Abu El-Heba
Pascal Ratet
Centre National de la Recherche Scientifique · FRInstitut des Sciences du Végétal · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have identified an active Medicago truncatula copia-like retroelement called Medicago RetroElement1-1 (MERE1-1) as an insertion in the symbiotic NSP2 gene. MERE1-1 belongs to a low-copy-number family in the sequenced Medicago genome. These copies are highly related, but only three of them have a complete coding region and polymorphism exists between the long terminal repeats of these different copies. This retroelement family is present in all M. truncatula ecotypes tested but also in other legume species like Lotus japonicus. It is active only during tissue culture in both R108 and Jemalong Medicago accessions and inserts preferentially in genes.

Indexed as

Mutagenesis, InsertionalRetroelementsBase SequenceCells, CulturedComputational BiologyDNA MethylationDNA, PlantGene DosageMedicago truncatulaMolecular Sequence DataPolymorphism, GeneticSequence Analysis, DNATerminal Repeat SequencesDNA, PlantRetroelements

Identifiers

PMID19656907
PMCPMC2773106
OpenAlexW2133499718

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.