Evidence map›Paper›PMID 19656775›Full record

ArticleHuman molecular genetics2009

Imprinting regulates mammalian snoRNA-encoding chromatin decondensation and neuronal nucleolar size.

Karen N Leung, Roxanne O Vallero, Amanda J DuBose, James L Resnick, Janine M LaSalle

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed, 1 pooled it
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 1 synthesis or guideline pooled it, 75 citations in OpenAlex.

  1. Recommendations for the investigation of animal models of Prader-Willi syndrome.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Guideline
  2. Light and sex modifybioRxiv : the preprint server for biology · 2025
    Article
  3. Review
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  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Epigenetics in Prader-Willi Syndrome.Frontiers in genetics · 2021
    Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Karen N LeungMicrobiology and Immunology and Rowe Program in Human Genetics, UC Davis School of Medicine, Davis, CA 95616, USA.
Roxanne O Vallero
Amanda J DuBose
James L Resnick
Janine M LaSalle
Florida College · USUniversity of California, Davis · US

Funding

A Natonal Resource for Postmortem Brain ResearchR24MH068855 · NIMH · MC LEAN HOSPITAL (BELMONT, MA) · PI BENES, FRANCINE M. · 2003 to 2012
$14.8M
The Role of MeCP2 in Rett SyndromeR01HD041462 · NICHD · UNIVERSITY OF CALIFORNIA DAVIS · PI LASALLE, JANINE M · 2002 to 2011
$2.8M
GENETIC COMPLEMENTATION OF A MOUSE MODEL FOR PWSR01HD037872 · NICHD · UNIVERSITY OF FLORIDA · PI RESNICK, JAMES L · 1999 to 2010
$2.2M
Epigenetic Etiologies of Autism-Spectrum DisordersR01HD048799 · NICHD · UNIVERSITY OF CALIFORNIA DAVIS · PI LASALLE, JANINE M · 2005 to 2009
$1.8M
EXTRAMURAL RESEARCH FACILITIES CONSTRUCTIONC06RR012088 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI CURRY, FITZ-ROY E · 1996 to 1996
–
NCRR NIH HHS C06 RR012088NCRR NIH HHS C06 RR-12088-01NICHD NIH HHS 1R01HD048799NICHD NIH HHS HD037872NICHD NIH HHS R01 HD037872NICHD NIH HHS R01 HD041462NICHD NIH HHS R01 HD048799NIMH NIH HHS R24 MH068855NIMH NIH HHS R24MH068855
6 · The paper itself

Abstract

Imprinting, non-coding RNA and chromatin organization are modes of epigenetic regulation that modulate gene expression and are necessary for mammalian neurodevelopment. The only two known mammalian clusters of genes encoding small nucleolar RNAs (snoRNAs), SNRPN through UBE3A(15q11-q13/7qC) and GTL2(14q32.2/12qF1), are neuronally expressed, localized to imprinted loci and involved in at least five neurodevelopmental disorders. Deficiency of the paternal 15q11-q13 snoRNA HBII-85 locus is necessary to cause the neurodevelopmental disorder Prader-Willi syndrome (PWS). Here we show epigenetically regulated chromatin decondensation at snoRNA clusters in human and mouse brain. An 8-fold allele-specific decondensation of snoRNA chromatin was developmentally regulated specifically in maturing neurons, correlating with HBII-85 nucleolar accumulation and increased nucleolar size. Reciprocal mouse models revealed a genetic and epigenetic requirement of the 35 kb imprinting center (IC) at the Snrpn-Ube3a locus for transcriptionally regulated chromatin decondensation. PWS human brain and IC deletion mouse Purkinje neurons showed significantly decreased nucleolar size, demonstrating the essential role of the 15q11-q13 HBII-85 locus in neuronal nucleolar maturation. These results are relevant to understanding the molecular pathogenesis of multiple human neurodevelopmental disorders, including PWS and some causes of autism.

Indexed as

Chromatin Assembly and DisassemblyGenomic ImprintingAdultAnimalsCell NucleolusChromatinChromosomes, MammalianHumansMaleMiceMice, Inbred C57BLMiddle AgedNeuronsPrader-Willi SyndromeRNA, Small NucleolarsnRNP Core ProteinsChromatinRNA, Small NucleolarsnRNP Core ProteinsUBE3A protein, humanUbe3a protein, mouseUbiquitin-Protein Ligases

Identifiers

PMID19656775
PMCPMC2766290
OpenAlexW2096556455

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.