Evidence map›Paper›PMID 19656296›Full record

ArticleMolecular microbiology2009

A novel genetic switch controls phase variable expression of CwpV, a Clostridium difficile cell wall protein.

Jenny E Emerson, Catherine B Reynolds, Robert P Fagan, Helen A Shaw, David Goulding, Neil F Fairweather

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 105 citations in OpenAlex.

  1. A programmed reset mechanism primesScience advances · 2026
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  2. Phase variable colony morphotypes ofInfection and immunity · 2026
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  3. Phylogenomic analysis of the collagen-like BclA proteins inApplied and environmental microbiology · 2026
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  4. Phase variation inEngineering microbiology · 2026
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  5. Phase variable colony morphotypes ofbioRxiv : the preprint server for biology · 2026
    Article
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  10. The RgaS-RgaR two-component system promotesbioRxiv : the preprint server for biology · 2023
    Article
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  12. Article
  13. Microbiology (Reading, England) · 2023
    Review
  14. Article
  15. Article
  16. Wolf in Sheep's Clothing:Microorganisms · 2021
    Review
  17. Review
  18. An RNA-centric global view ofProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Article
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jenny E EmersonDivision of Cell and Molecular Biology, Imperial College London, London SW7 2AZ, UK.
Catherine B Reynolds
Robert P Fagan
Helen A Shaw
David Goulding
Neil F Fairweather
Imperial College London · GBUniversity of Oxford · GBWellcome Sanger Institute · GB

Funding

Medical Research Council G0800170Wellcome Trust
6 · The paper itself

Abstract

Clostridium difficile is a nosocomial pathogen that can cause severe gastrointestinal infections. C. difficile encodes a family of cell wall proteins, some of which are implicated in pathogenesis. Here we have characterized CwpV, the largest member of this family. CwpV is surface expressed and post-translationally processed in a manner analogous to the major S-layer protein SlpA. Expression of cwpV is phase variable, with approximately 5% of cells in a population expressing the protein under standard laboratory growth conditions. Upstream of cwpV, inverted repeats flank a 195 bp sequence which undergoes DNA inversion. Use of a gusA transcriptional reporter demonstrated that phase variation is mediated by DNA inversion; in one orientation cwpV is expressed while in the opposite orientation the gene is silent. The inversion region contains neither the promoter nor any of the open reading frame, therefore this system differs from previously described phase variation mechanisms. The cwpV promoter is located upstream of the inversion region and we propose a model of phase variation based on intrinsic terminator formation in the OFF transcript. A C. difficile site-specific recombinase able to catalyse the inversion has been identified.

Indexed as

Gene Expression Regulation, BacterialAntigens, BacterialBacterial Outer Membrane ProteinsBacterial Typing TechniquesBase SequenceCell WallChromosome InversionCloning, MolecularClostridioides difficileConserved SequenceDNA, BacterialDNA NucleotidyltransferasesEscherichia coliMultigene FamilyPromoter Regions, GeneticRepressor ProteinsAntigens, BacterialBacterial Outer Membrane ProteinsDNA, BacterialDNA NucleotidyltransferasesRepressor ProteinsSite-specific recombinase

Identifiers

PMID19656296
PMCPMC2784873
OpenAlexW2157129729

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.