Evidence map›Paper›PMID 19655145›Full record

ArticleRheumatology international2010

HLA-B, DR and DQ antigens polymorphism in Tunisian patients with ankylosing spondylitis (a case-control study).

Mohamed Montacer Kchir, Wafa Hamdi, Lilia Laadhar, Samir Kochbati, Dhia Kaffel, Kaouthar Saadellaoui, Houria Lahmar, Mohamed Mehdi Ghannouchi, Dhouha Azzouz, Lilia Daoud and 4 more

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In one paragraph

Article in Rheumatology international, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 2 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 2 syntheses or guidelines pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Rheumatic diseases in Africa.Nature reviews. Rheumatology · 2021
    Review
  9. Ankylosing spondylitis: analysis of gene-gene interactions betweenCentral-European journal of immunology · 2019
    Article
  10. Article
  11. Article
  12. Clinical characteristics of Japanese patients with axial spondyloarthritis, and short-term efficacy of adalimumab.Journal of orthopaedic science : official journal of the Japanese Orthopaedic Association · 2015
    Article
  13. Revisiting MHC genes in spondyloarthritis.Current rheumatology reports · 2015
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Mohamed Montacer KchirSpinal Diseases Research Unit, UR04SP06, Department of Rheumatology, Institute M Kassab, Manouba, 2010, Tunisia.
Wafa Hamdi
Lilia Laadhar
Samir Kochbati
Dhia Kaffel
Kaouthar Saadellaoui
Houria Lahmar
Mohamed Mehdi Ghannouchi
Dhouha Azzouz
Lilia Daoud
Abdelmajid Ben Hamida
Béchir Zouari
Mondher Zitouni
Sondes Makni
Manouba University · TNHôpital La Rabta · TN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The objective of the study is to assess the distribution of HLA-B genes, HLA-B27 subtypes, HLA-DRB1 and HLA-DQB1 alleles in patients with ankylosing spondylitis (AS) and in control subjects in the Tunisian population and to compare their distribution with that found in other countries. This is a case-control study that included 100 consecutive patients (85 males/15 females) with AS according to the modified New York criteria and 100 control individuals. HLA-B, B27 subtypes and class II (DR and DQ) typing of all subjects was performed by polymerase chain reaction amplification with sequence-specific primers (PCR-SSP). HLA-B27 was found in 62% of patients against 3% in controls (P = 0.0000, OR = 52.6, 15.6 < CI < 166.7). On the other hand, B*07 and B*51 were significantly decreased in comparison with controls (P = 0.01, OR = 0.3, 0.1 < CI < 0.8 and P = 0.0000, OR = 0.2, 0.1 < CI < 0.4, respectively). Eight B*27 subtypes were identified in the AS group, but the most frequent ones were B*2702 (32%) and B*2705 (24%). Among HLA-DRB1 alleles, a significant increase in DRB1*11 was found in comparison with controls (P = 0.01, OR = 2.2, 1.2 < CI < 4.5). However, DRB1*13 had a negative association with AS (P = 0.01, OR = 0.4, 0.2 < CI < 0.8). For HLA-DQB1 alleles, a significant positive association with DQB1*03 was observed in AS group (P = 0.03, OR = 1.8, 1.0 < CI < 3.4). Multivariate analysis by logistic regression revealed that DRB1*11 and DQB1*03 had no direct links with the disease, but were dependent on the presence of HLA-B27. Moreover, B*07 and B*51 seemed to have independently a negative correlation with AS, but DRB1*13 seemed to depend on B*51. Haplotypes carrying B27 were significantly associated with AS and those carrying B*07 or B*51 were negatively correlated with the disease. In conclusion, our study confirms that B27 predisposes to AS while B*07 and B*51 are negatively correlated with the disease.

Indexed as

AdolescentAdultAgedBiomarkersCase-Control StudiesDNA Mutational AnalysisFemaleGene FrequencyGenetic MarkersGenetic Predisposition to DiseaseGenetic TestingGenotypeHLA-B27 AntigenHLA-B AntigensHLA-DQ AntigensHLA-DQ beta-ChainsBiomarkersGenetic MarkersHLA-B27 AntigenHLA-B AntigensHLA-DQ AntigensHLA-DQB1 antigenHLA-DQ beta-ChainsHLA-DR AntigensHLA-DRB1 ChainsRNA, Messenger

Identifiers

PMID19655145
OpenAlexW2076807813

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.