Evidence map›Paper›PMID 19654310›Full record

ArticleCancer research2009

A loss-of-function polymorphism in the propeptide domain of the LOX gene and breast cancer.

Chengyin Min, Ziyang Yu, Kathrin H Kirsch, Yingshe Zhao, Siddharth R Vora, Philip C Trackman, Douglas B Spicer, Lynn Rosenberg, Julie R Palmer, Gail E Sonenshein

Open access · bronzeAbstract read
In one paragraph

Article in Cancer research, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 64 citations in OpenAlex.

  1. Pooled it
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  13. Functional importance of lysyl oxidase family propeptide regions.Journal of cell communication and signaling · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Chengyin MinDepartment of Biochemistry, Boston University School of Medicine, Massachusetts 02118, USA.
Ziyang Yu
Kathrin H Kirsch
Yingshe Zhao
Siddharth R Vora
Philip C Trackman
Douglas B Spicer
Lynn Rosenberg
Julie R Palmer
Gail E Sonenshein
Boston University · USMaine Medical Center Research Institute · US

Funding

FOLLOW-UP STUDY FOR CAUSES OF ILLNESS IN BLACK WOMENR01CA058420 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ROSENBERG, LYNN · 1999 to 2013
$20.7M
Gene Polymorphisms in Relation to Cancer in Black WomenR01CA098663 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI PALMER, JULIE R · 2003 to 2012
$5.3M
Inhibited Intramembranous Bone Healing in DiabetesR01DE014066 · NIDCR · BOSTON UNIVERSITY MEDICAL CAMPUS · PI TRACKMAN, PHILIP C · 2003 to 2013
$3.0M
NFKB/REL AND THE PATHOGENESIS OF BREAST CANCERR01CA082742 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SONENSHEIN, GAIL E. · 1999 to 2008
$2.2M
Functional role of p130Cas/BCAR1 in breast cancerR01CA106468 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KIRSCH, KATHRIN H · 2005 to 2009
$1.4M
NCI NIH HHS CA058420NCI NIH HHS CA082742NCI NIH HHS CA098663NCI NIH HHS CA106468NCI NIH HHS R01 CA058420NCI NIH HHS R01 CA082742NCI NIH HHS R01 CA098663NCI NIH HHS R01 CA106468NIDCR NIH HHS DE14066NIDCR NIH HHS R01 DE014066
6 · The paper itself

Abstract

The lysyl oxidase (LOX) gene reverted Ras transformation of NIH 3T3 fibroblasts and tumor formation by gastric cancer cells, which frequently carry mutant RAS genes. The secreted lysyl oxidase proenzyme is processed to a propeptide (LOX-PP) and a functional enzyme (LOX). Unexpectedly, the tumor suppressor activity mapped to the LOX-PP domain, which inhibited tumor formation and the invasive phenotype of NF639 breast cancer cells driven by human epidermal growth factor receptor-2/neu, which signals via Ras. A single-nucleotide polymorphism, G473A (rs1800449), resulting in an Arg158Gln substitution in a highly conserved region within LOX-PP, occurs with an average 473A allele carrier frequency of 24.6% in the HapMap database, but was present in many breast cancer cell lines examined. Here, we show that the Arg-to-Gln substitution profoundly impairs the ability of LOX-PP to inhibit the invasive phenotype and tumor formation of NF639 cells in a xenograft model. LOX-PP Gln displayed attenuated ability to oppose the effects of LOX, which promoted a more invasive phenotype. In a case-control study of African American women, a potential association of the Gln-encoding A allele was seen with increased risk of estrogen receptor (ER)-alpha-negative invasive breast cancer in African American women. Consistently, LOX gene expression was higher in ER-negative versus ER-positive primary breast cancers, and LOX-PP Gln was unable to inhibit invasion by ER-negative cell lines. Thus, these findings identify for the first time genetic polymorphism as a mechanism of impaired tumor suppressor function of LOX-PP and suggest that it may play an etiologic role in ER-negative breast cancer.

Indexed as

Mutation, MissenseAdultAgedAmino Acid SequenceAnimalsBreast NeoplasmsCells, CulturedFemaleHumansMiceMice, NudeMiddle AgedMolecular Sequence DataPolymorphism, Single NucleotideProtein-Lysine 6-OxidaseProtein PrecursorsProtein-Lysine 6-OxidaseProtein Precursors

Identifiers

PMID19654310
PMCPMC2729564
OpenAlexW1993969378

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.