Evidence map›Paper›PMID 19653300›Full record

ArticleProtein science : a publication of the Protein Society2009

Proligands with protease-regulated binding activity identified from cell-displayed prodomain libraries.

Jerry M Thomas, Patrick S Daugherty

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
  3. FimH as a scaffold for regulated molecular recognition.Journal of biological engineering · 2021
    Article
  4. Article
  5. Article
  6. Getting physical to fix pharma.Nature chemistry · 2011
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jerry M ThomasDepartment of Chemical Engineering, University of California, Santa Barbara, 93106, USA.
Patrick S Daugherty

Funding

Tumor Therapy/Annihilation Using a Smart NanoPlatform (SNaP)U54CA119335 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ESENER, SADIK · 2005 to 2010
$21.2M
Nanotherapy for Vulnerable PlaqueU01HL080718 · NHLBI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI SMITH, JEFFREY W · 2005 to 2009
$12.8M
NCI NIH HHS 5 U54 CA119335-04NHLBI NIH HHS 5 U01 HL080718-04
6 · The paper itself

Abstract

A general method was developed for the discovery of protease-activated binding ligands, or proligands, from combinatorial prodomain libraries displayed on the surface of E. coli. Peptide libraries of candidate prodomains were fused with a matrix metalloprotease-2 substrate linker to a vascular endothelial growth factor-binding peptide and sorted using a two-stage flow cytometry screening procedure to isolate proligands that required protease treatment for binding activity. Prodomains that imparted protease-mediated switching activity were identified after three sorting cycles using two unique library design strategies. The best performing proligand exhibited a 100-fold improvement in apparent binding affinity after exposure to protease. This method may prove useful for developing therapeutic and diagnostic ligands with improved systemic targeting specificity.

Indexed as

Combinatorial Chemistry TechniquesCloning, MolecularEscherichia coliHumansLigandsMatrix Metalloproteinase 2Peptide HydrolasesPeptide LibraryPeptidesProtein BindingVascular Endothelial Growth Factor ALigandsMatrix Metalloproteinase 2MMP2 protein, humanPeptide HydrolasesPeptide LibraryPeptidesVascular Endothelial Growth Factor A

Identifiers

PMID19653300
PMCPMC2786969

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.