Evidence map›Paper›PMID 19652201›Full record

Trial reportBlood2009

MDS and secondary AML display unique patterns and abundance of aberrant DNA methylation.

Maria E Figueroa, Lucy Skrabanek, Yushan Li, Anchalee Jiemjit, Tamer E Fandy, Elisabeth Paietta, Hugo Fernandez, Martin S Tallman, John M Greally, Hetty Carraway and 3 more

Registry-linked trialOpen access · greenAbstract readClinical Trial
In one paragraph

Trial report in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04806906 (A Phase 2, Monocentric, Pilot Study to Evaluate Safety and Efficacy of CC 486), which is not on this map. Cited by 176 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
176citing papers in PubMed, 1 pooled it
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04806906 phase2completednot on this mapstarted 2021, after this paper: background citation

A Phase 2, Monocentric, Pilot Study to Evaluate Safety and Efficacy of CC 486 (Oral Azacitidine) Plus Best Supportive Care as Maintenance of Response to sc Azacitidine in IPSS Higher Risk Elderly MDS Patients

TypeinterventionalSponsorUniversity of FlorenceRan2021 to 2025Enrolled11ConditionsMDS, CMMLArmsCC-486
3 · Its place in the literature

Who cites it

176 citing papers in PubMed, 1 synthesis or guideline pooled it, 329 citations in OpenAlex.

  1. Pooled it
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  19. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  20. Article

116 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Maria E FigueroaDepartment of Medicine (Hematology Oncology Division), Weill Cornell Medical College, New York, NY 10065, USA. amm2014@med.cornell.edu
Lucy Skrabanek
Yushan Li
Anchalee Jiemjit
Tamer E Fandy
Elisabeth Paietta
Hugo Fernandez
Martin S Tallman
John M Greally
Hetty Carraway
Jonathan D Licht
Steven D Gore
Ari Melnick
Sidney Kimmel Comprehensive Cancer Center · USCornell University · USNorthwestern University · USAlbert Einstein College of Medicine · USMoffitt Cancer Center · USMontefiore Medical Center · USPalmetto Hematology Oncology · US

Funding

ECOG OPERATIONS OFFICE (IBCSG)U10CA021115 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI COMIS, ROBERT L · 1985 to 2013
$132.6M
TRANS-NETWORK PROJECTSU54CA143876 · NCI · CORNELL UNIVERSITY · PI SHULER, MICHAEL L · 2009 to 2014
$12.6M
ECOG Specimen BankingU24CA114737 · NCI · FRONTIER SCI &TECHNOLOGY RSCH FDN, INC · PI COMIS, ROBERT L · 2005 to 2014
$9.3M
PHASE I TRIALS OF ANTICANCER AGENTSU01CA070095 · NCI · JOHNS HOPKINS UNIVERSITY · PI CARDUCCI, MICHAEL A · 1995 to 2013
$8.6M
Transcriptional silencing by the BCL6 oncoproteinR01CA104348 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MELNICK, ARI M. · 2004 to 2014
$2.6M
Targeting Epigenomics in Myeloid NeoplasmsK24CA111717 · NCI · YALE UNIVERSITY · PI GORE, STEVEN D · 2005 to 2015
$1.7M
Mechanism of combined 'epigenetic therapy' in myeloid malignanciesR01CA125635 · NCI · JOHNS HOPKINS UNIVERSITY · PI GORE, STEVEN D · 2007 to 2009
$1.5M
Genomic analysis of mammalian imprinted lociR01HD044078 · NICHD · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI GREALLY, JOHN · 2005 to 2008
$1.2M
5-Azacytidine and MS-275 in Myeloid MalignanciesR21CA110507 · NCI · JOHNS HOPKINS UNIVERSITY · PI GORE, STEVEN D · 2004 to 2005
$543k
NCI NIH HHS CA21115NCI NIH HHS K24 CA111717NCI NIH HHS R01 CA104348NCI NIH HHS R01 CA125635NCI NIH HHS R21 CA110507NCI NIH HHS U01 CA070095NCI NIH HHS U01CA70095NCI NIH HHS U10 CA021115NCI NIH HHS U24 CA114737NCI NIH HHS U54 CA143876NICHD NIH HHS R01 HD044078
6 · The paper itself

Abstract

Increasing evidence shows aberrant hypermethylation of genes occurring in and potentially contributing to pathogenesis of myeloid malignancies. Several of these diseases, such as myelodysplastic syndromes (MDSs), are responsive to DNA methyltransferase inhibitors. To determine the extent of promoter hypermethylation in such tumors, we compared the distribution of DNA methylation of 14 000 promoters in MDS and secondary acute myeloid leukemia (AML) patients enrolled in a phase 1 trial of 5-azacytidine and the histone deacetylase inhibitor entinostat against de novo AML patients and normal CD34(+) bone marrow cells. The MDS and secondary AML patients displayed more extensive aberrant DNA methylation involving thousands of genes than did the normal CD34(+) bone marrow cells or de novo AML blasts. Aberrant methylation in MDS and secondary AML tended to affect particular chromosomal regions, occurred more frequently in Alu-poor genes, and included prominent involvement of genes involved in the WNT and MAPK signaling pathways. DNA methylation was also measured at days 15 and 29 after the first treatment cycle. DNA methylation was reversed at day 15 in a uniform manner throughout the genome, and this effect persisted through day 29, even without continuous administration of the study drugs. This trial was registered at www.clinicaltrials.gov as J0443.

Indexed as

Leukemia, Myeloid, AcuteMyelodysplastic SyndromesAntigens, CD34AzacitidineBone Marrow CellsDNA MethylationDNA, NeoplasmEnzyme InhibitorsFemaleHistone Deacetylase InhibitorsHistone DeacetylasesHumansMaleMAP Kinase Signaling SystemNeoplasms, Second PrimaryPromoter Regions, GeneticAntigens, CD34AzacitidineDNA, NeoplasmEnzyme InhibitorsHistone Deacetylase InhibitorsHistone DeacetylasesWnt Proteins

Identifiers

PMID19652201
PMCPMC2765680
OpenAlexW2036263818

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.