Evidence map›Paper›PMID 19652175›Full record

ArticleGenetics2009

Alcohol sensitivity in Drosophila: translational potential of systems genetics.

Tatiana V Morozova, Julien F Ayroles, Katherine W Jordan, Laura H Duncan, Mary Anna Carbone, Richard F Lyman, Eric A Stone, Diddahally R Govindaraju, R Curtis Ellison, Trudy F C Mackay and 1 more

Abstract read
In one paragraph

Article in Genetics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Review
  3. Learning & memory (Cold Spring Harbor, N.Y.) · 2024
    Review
  4. Article
  5. Article
  6. TheJournal of neurogenetics · 2021
    Article
  7. Flying Together:International journal of molecular sciences · 2020
    Review
  8. Article
  9. Article
  10. Review
  11. Insights from intoxicated Drosophila.Alcohol (Fayetteville, N.Y.) · 2019
    Review
  12. Article
  13. The road less traveled: from genotype to phenotype in flies and humans.Mammalian genome : official journal of the International Mammalian Genome Society · 2018
    Article
  14. A Fly's Eye View of Natural and Drug Reward.Frontiers in physiology · 2018
    Review
  15. Article
  16. Review
  17. Genetic architecture of natural variation in visual senescence in Drosophila.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tatiana V MorozovaDepartment of Biology, W. M. Keck Center for Behavioral Biology, North Carolina State University, Raleigh, NC 27695, USA.
Julien F Ayroles
Katherine W Jordan
Laura H Duncan
Mary Anna Carbone
Richard F Lyman
Eric A Stone
Diddahally R Govindaraju
R Curtis Ellison
Trudy F C Mackay
Robert R H Anholt

Funding

Molecular Genetics of Olfaction in DrosophiliaR01GM059469 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 1999 to 2016
$5.8M
QUANTITATIVE TRAIT LOCI IN DROSOPHILAR01GM045146 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 1991 to 2012
$5.1M
Net Lifetime Health Effects of Alcohol Use &AbuseR01AA013304 · NIAAA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ELLISON, R. CURTIS · 2003 to 2007
$3.6M
NIAAA NIH HHS AA013304NIAAA NIH HHS AA016569NIAAA NIH HHS R01 AA013304NIGMS NIH HHS GM45146NIGMS NIH HHS GM59469NIGMS NIH HHS R01 GM045146NIGMS NIH HHS R01 GM059469
6 · The paper itself

Abstract

Identification of risk alleles for human behavioral disorders through genomewide association studies (GWAS) has been hampered by a daunting multiple testing problem. This problem can be circumvented for some phenotypes by combining genomewide studies in model organisms with subsequent candidate gene association analyses in human populations. Here, we characterized genetic networks that underlie the response to ethanol exposure in Drosophila melanogaster by measuring ethanol knockdown time in 40 wild-derived inbred Drosophila lines. We associated phenotypic variation in ethanol responses with genomewide variation in gene expression and identified modules of correlated transcripts associated with a first and second exposure to ethanol vapors as well as the induction of tolerance. We validated the computational networks and assessed their robustness by transposon-mediated disruption of focal genes within modules in a laboratory inbred strain, followed by measurements of transcript abundance of connected genes within the module. Many genes within the modules have human orthologs, which provides a stepping stone for the identification of candidate genes associated with alcohol drinking behavior in human populations. We demonstrated the potential of this translational approach by identifying seven intronic single nucleotide polymorphisms of the Malic Enzyme 1 (ME1) gene that are associated with cocktail drinking in 1687 individuals of the Framingham Offspring cohort, implicating that variation in levels of cytoplasmic malic enzyme may contribute to variation in alcohol consumption.

Indexed as

Alcohol DrinkingAnimalsCluster AnalysisDrosophila melanogasterDrosophila ProteinsEthanolFemaleGene Expression RegulationGene Regulatory NetworksGenes, InsectGenetic VariationGenome, InsectGenome-Wide Association StudyGenotypeHumansInbreedingDrosophila ProteinsEthanolMalate Dehydrogenase

Identifiers

PMID19652175
PMCPMC2766331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.