Evidence map›Paper›PMID 19651915›Full record

ArticleAntimicrobial agents and chemotherapy2009

IND-6, a highly divergent IND-type metallo-beta-lactamase from Chryseobacterium indologenes strain 597 isolated in Burkina Faso.

Boukaré Zeba, Filomena De Luca, Alain Dubus, Michael Delmarcelle, Jacques Simporé, Odile G Nacoulma, Gian Maria Rossolini, Jean-Marie Frère, Jean-Denis Docquier

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In one paragraph

Article in Antimicrobial agents and chemotherapy, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Case reports in ophthalmological medicine · 2021
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  7. Review
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  14. Article
  15. Draft genome sequence of Chryseobacterium limigenitum SUR2Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Boukaré ZebaLaboratoire de Chimie et de Biochimie Appliquée (UFR-SVT), University of Ouagadougou, 03 BP 7021 Ouagadougou, Burkina Faso.
Filomena De Luca
Alain Dubus
Michael Delmarcelle
Jacques Simporé
Odile G Nacoulma
Gian Maria Rossolini
Jean-Marie Frère
Jean-Denis Docquier
Université Joseph Ki-Zerbo · BFUniversity of Liège · BEUniversity of Siena · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Chryseobacterium and other genera belonging to the family Flavobacteriaceae include organisms that can behave as human pathogens and are known to cause different kinds of infections. Several species of Flavobacteriaceae, including Chryseobacterium indologenes, are naturally resistant to beta-lactam antibiotics (including carbapenems), due to the production of a resident metallo-beta-lactamase. Although C. indologenes presently constitutes a limited clinical threat, the incidence of infections caused by this organism is increasing in some settings, where isolates that exhibit multidrug resistance phenotypes (including resistance to aminoglycosides and quinolones) have been detected. Here, we report the identification and characterization of a new IND-type variant from a C. indologenes isolate from Burkina Faso that is resistant to beta-lactams and aminoglycosides. The levels of sequence identity of the new variant to other IND-type metallo-beta-lactamases range between 72 and 90% (for IND-4 and IND-5, respectively). The purified enzyme exhibited N-terminal heterogeneity and a posttranslational modification consisting of the presence of a pyroglutamate residue at the N terminus. IND-6 shows a broad substrate profile, with overall higher turnover rates than IND-5 and higher activities than IND-2 and IND-5 against ceftazidime and cefepime.

Indexed as

AdultAmino Acid SequenceAnti-Bacterial Agentsbeta-LactamasesCefepimeCeftazidimeCephalexinCephalosporinsCephalothinChryseobacteriumFemaleHumansMicrobial Sensitivity TestsMolecular Sequence DataPhylogenyProtein Structure, SecondaryAnti-Bacterial Agentsbeta-LactamasesCefepimeCeftazidimeCephalexinCephalosporinsCephalothin

Identifiers

PMID19651915
PMCPMC2764149
OpenAlexW2098865325

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.