Evidence map›Paper›PMID 19649330›Full record

ArticlePLoS pathogens2009

Trans-dominant inhibition of prion propagation in vitro is not mediated by an accessory cofactor.

James C Geoghegan, Michael B Miller, Aimee H Kwak, Brent T Harris, Surachai Supattapone

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
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  17. Prion transmission prevented by modifying the β2-α2 loop structure of host PrPC.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
    Article
  18. De novo generation of infectious prions with bacterially expressed recombinant prion protein.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2013
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

James C GeogheganDepartment of Biochemistry, Dartmouth Medical School, Hanover, NH, USA.
Michael B Miller
Aimee H Kwak
Brent T Harris
Surachai Supattapone
Dartmouth College · US

Funding

Origin and Mechanism of Promiscuous Prion StrainsR01NS046478 · NINDS · DARTMOUTH COLLEGE · PI SUPATTAPONE, SURACHAI · 2004 to 2017
$5.0M
NINDS NIH HHS R01 NS046478
6 · The paper itself

Abstract

Previous studies identified prion protein (PrP) mutants which act as dominant negative inhibitors of prion formation through a mechanism hypothesized to require an unidentified species-specific cofactor termed protein X. To study the mechanism of dominant negative inhibition in vitro, we used recombinant PrP(C) molecules expressed in Chinese hamster ovary cells as substrates in serial protein misfolding cyclic amplification (sPMCA) reactions. Bioassays confirmed that the products of these reactions are infectious. Using this system, we find that: (1) trans-dominant inhibition can be dissociated from conversion activity, (2) dominant-negative inhibition of prion formation can be reconstituted in vitro using only purified substrates, even when wild type (WT) PrP(C) is pre-incubated with poly(A) RNA and PrP(Sc) template, and (3) Q172R is the only hamster PrP mutant tested that fails to convert into PrP(Sc) and that can dominantly inhibit conversion of WT PrP at sub-stoichiometric levels. These results refute the hypothesis that protein X is required to mediate dominant inhibition of prion propagation, and suggest that PrP molecules compete for binding to a nascent seeding site on newly formed PrP(Sc) molecules, most likely through an epitope containing residue 172.

Indexed as

AnimalsBiological AssayBrain ChemistryBrain StemCHO CellsCricetinaeCricetulusHistocytochemistryMiceModels, BiologicalPrion DiseasesPrionsProtein FoldingPrPC ProteinsRNA, MessengerPrionsPrPC ProteinsRNA, Messenger

Identifiers

PMID19649330
PMCPMC2713408
OpenAlexW2059629233

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.