Evidence map›Paper›PMID 19649286›Full record

ArticlePloS one2009

Cytosolic SYT/SS18 isoforms are actin-associated proteins that function in matrix-specific adhesion.

Jaehong Kim, Mei Swee, William C Parks

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 6 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jaehong KimCenter for Lung Biology, University of Washington, Seattle, Washington, United States of America.
Mei Swee
William C Parks
University of Washington · USWashington University in St. Louis · US

Funding

VASCULAR CELL DIVERSITY IN PULMONARY HYPERTENSIONP01HL029594 · NHLBI · WASHINGTON UNIVERSITY · PI HOLTZMAN, MICHAEL J · 1985 to 2012
$23.8M
Epithelial MMPs in Airway RepairR01HL077555 · NHLBI · UNIVERSITY OF WASHINGTON · PI PARKS, WILLIAM C · 2004 to 2008
$2.1M
NHLBI NIH HHS HL029594NHLBI NIH HHS HL077555NHLBI NIH HHS P01 HL029594NHLBI NIH HHS R01 HL077555
6 · The paper itself

Abstract

SYT (SYnovial sarcoma Translocated gene or SS18) is widely produced as two isoforms, SYT/L and SYT/S, that are thought to function in the nucleus as transcriptional coactivators. Using isoform-specific antibodies, we detected a sizable pool of SYT isoforms in the cytosol where the proteins were organized into filamentous arrays. Actin and actin-associated proteins co-immunoprecipitated with SYT isoforms, which also co-sedimented and co-localized with the actin cytoskeleton in cultured cells and tissues. The association of SYT with actin bundles was extensive yet stopped short of the distal ends at focal adhesions. Disruption of the actin cytoskeleton also led to a breakdown of the filamentous organization of SYT isoforms in the cytosol. RNAi ablation of SYT/L alone or both isoforms markedly impaired formation of stress fibers and focal adhesions but did not affect formation of cortical actin bundles. Furthermore, ablation of SYT led to markedly impaired adhesion and spreading on fibronectin and laminin-111 but not on collagen types I or IV. These findings indicate that cytoplasmic SYT isoforms interact with actin filaments and function in the ability cells to bind and react to specific extracellular matrices.

Indexed as

Cell AdhesionActinsBiopolymersCell LineCytosolExtracellular MatrixFluorescent Antibody TechniqueHumansImmunoprecipitationProtein IsoformsProto-Oncogene ProteinsRepressor ProteinsActinsBiopolymersProtein IsoformsProto-Oncogene ProteinsRepressor ProteinsSS18 protein, human

Identifiers

PMID19649286
PMCPMC2714072
OpenAlexW2036974397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.