Evidence map›Paper›PMID 19646907›Full record

ArticleMolecular cell2009

Trypanosomes have six mitochondrial DNA helicases with one controlling kinetoplast maxicircle replication.

Beiyu Liu, Jianyang Wang, Nurit Yaffe, Megan E Lindsay, Zhixing Zhao, Aviad Zick, Joseph Shlomai, Paul T Englund

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 71 citations in OpenAlex.

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  15. Proteomic Analysis of the Cell Cycle of Procylic FormMolecular & cellular proteomics : MCP · 2018
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Beiyu LiuDepartment of Biological Chemistry, Johns Hopkins Medical School, Baltimore, MD 21205, USA.
Jianyang Wang
Nurit Yaffe
Megan E Lindsay
Zhixing Zhao
Aviad Zick
Joseph Shlomai
Paul T Englund
Johns Hopkins University · USHadassah Medical Center · IL

Funding

STRUCTURE AND SYNTHESIS OF DNAR01AI058613 · NIAID · JOHNS HOPKINS UNIVERSITY · PI JENSEN, ROBERT E · 2004 to 2013
$7.4M
NIAID NIH HHS AI058613NIAID NIH HHS R01 AI058613
6 · The paper itself

Abstract

Kinetoplast DNA (kDNA), the trypanosome mitochondrial DNA, contains thousands of minicircles and dozens of maxicircles interlocked in a giant network. Remarkably, Trypanosoma brucei's genome encodes 8 PIF1-like helicases, 6 of which are mitochondrial. We now show that TbPIF2 is essential for maxicircle replication. Maxicircle abundance is controlled by TbPIF2 level, as RNAi of this helicase caused maxicircle loss, and its overexpression caused a 3- to 6-fold increase in maxicircle abundance. This regulation of maxicircle level is mediated by the TbHslVU protease. Previous experiments demonstrated that RNAi knockdown of TbHslVU dramatically increased abundance of minicircles and maxicircles, presumably because a positive regulator of their synthesis escaped proteolysis and allowed synthesis to continue. Here, we found that TbPIF2 level increases following RNAi of the protease. Therefore, this helicase is a TbHslVU substrate and an example of a positive regulator, thus providing a molecular mechanism for controlling maxicircle replication.

Indexed as

DNA ReplicationAnimalsDNA HelicasesDNA, KinetoplastDNA, MitochondrialDNA, ProtozoanGene Expression RegulationMutationPeptide HydrolasesProtozoan ProteinsRNA InterferenceTime FactorsTransfectionTrypanosoma brucei bruceiDNA HelicasesDNA, KinetoplastDNA, MitochondrialDNA, ProtozoanPeptide HydrolasesProtozoan Proteins

Identifiers

PMID19646907
PMCPMC2763077
OpenAlexW2083220762

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.