Evidence map›Paper›PMID 19643959›Full record

ArticleInvestigative ophthalmology & visual science2009

Detection of differentially expressed wound-healing-related glycogenes in galectin-3-deficient mice.

Chandrassegar Saravanan, Zhiyi Cao, Steven R Head, Noorjahan Panjwani

Open access · greenAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Galectin-3: One Molecule for an Alphabet of Diseases, from A to Z.International journal of molecular sciences · 2018
    Review
  5. Article
  6. Matricellular proteins in the trabecular meshwork: review and update.Journal of ocular pharmacology and therapeutics : the official journal of the Association for Ocular Pharmacology and Therapeutics · 2014
    Review
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Chandrassegar SaravananDepartment of Ophthalmology and The New England Eye Center.
Zhiyi Cao
Steven R Head
Noorjahan Panjwani
Eye Center · SAScripps Research Institute · USTufts University · US

Funding

Structural Basis of Immune Recognition of Glycosylated AntigensU54GM062116 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SASISEKHARAN, RAM · 2001 to 2010
$80.3M
The Role of Galectins in Corneal Hem- and LymphangiogenesisR01EY007088 · NEI · TUFTS UNIVERSITY BOSTON · PI PANJWANI, NOORJAHAN · 1987 to 2015
$3.6M
Supplement to Core Grant for Vision ResearchP30EY013078 · NEI · TUFTS MEDICAL CENTER · PI PANJWANI, NOORJAHAN · 2001 to 2005
$3.0M
SHORT TERM TRAINING--STUDENTS IN HEALTH PROFESSIONST35EY007088 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FRISHMAN, LAURA J. · 1985 to 2025
$2.3M
FMRI STUDIES;VISUAL EXPERIENCE AND NEURONAL CHANGESF32EY007088 · NEI · MAX PLANCK INST/BIOLOGICAL CYBERNETICS · PI TOLIAS, ANDREAS SAVAS · 2000 to 2003
$116k
NEI NIH HHS EY007088NEI NIH HHS F32 EY007088NEI NIH HHS P30 EY013078NEI NIH HHS P30EY13078NEI NIH HHS R01 EY007088NEI NIH HHS T35 EY007088NIGMS NIH HHS GM62116NIGMS NIH HHS U54 GM062116
6 · The paper itself

Abstract

purposeA prior study showed that exogenous galectin-3 (Gal-3) stimulates re-epithelialization of corneal wounds in wild-type (Gal-3(+/+)) mice but, surprisingly, not in galectin-3-deficient (Gal-3(-/-)) mice. In an effort to understand why the injured corneas of Gal-3(-/-) mice are unresponsive to exogenous Gal-3, the present study was designed to determine whether genes encoding the enzymes that regulate the synthesis of glycan ligands of Gal-3 are differentially expressed in Gal-3(-/-) corneas compared with the Gal-3(+/+) corneas.

methodsGlycogene microarray technology was used to identify differentially expressed glycosyltransferases in healing Gal-3(+/+) and Gal-3(-/-) corneas.

resultsOf approximately 2000 glycogenes on the array, the expression of 8 was upregulated and that of 14 was downregulated more than 1.3-fold in healing Gal-3(-/-) corneas. A galactosyltransferase, beta3GalT5, which has the ability to synthesize Gal-3 ligands was markedly downregulated in healing Gal-3(-/-) corneas. The genes for polypeptide galactosaminyltransferases (ppGalNAcT-3 and -7) that are known to initiate O-linked glycosylation and N-aspartyl-beta-glucosaminidase, which participates in the removal of N-glycans, were found to be upregulated in healing Gal-3(-/-) corneas. Microarray data were validated by qRT-PCR.

conclusionsBased on the known functions of the differentially expressed glycogenes, it appears that the glycan structures on glycoproteins and glycolipids, synthesized as a result of the differential glycogene expression pattern in healing Gal-3(-/-) corneas may lead to the downregulation of specific counterreceptors for Gal-3. This may explain, at least in part, why, unlike healing Gal-3(+/+) corneas, the healing Gal-3(-/-) corneas are unresponsive to the stimulatory effect of exogenous Gal-3 on re-epithelialization of corneal wounds.

Indexed as

Corneal InjuriesAnimalsEye InjuriesGalectin 3Gene Expression ProfilingGene Expression RegulationGlycoside HydrolasesGlycosyltransferasesLasersLasers, ExcimerMiceMice, KnockoutOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionUp-RegulationWound HealingGalectin 3Glycoside HydrolasesGlycosyltransferases

Identifiers

PMID19643959
PMCPMC3005591
OpenAlexW1982297496

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.