Evidence map›Paper›PMID 19633202›Full record

ArticleBlood2009

Mutational spectrum at GATA1 provides insights into mutagenesis and leukemogenesis in Down syndrome.

Diane C Cabelof, Hiral V Patel, Qing Chen, Holly van Remmen, Larry H Matherly, Yubin Ge, Jeffrey W Taub

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Contributions of DNA Damage to Alzheimer's Disease.International journal of molecular sciences · 2020
    Review
  11. Cellular Senescence in Neurodegenerative Diseases.Frontiers in cellular neuroscience · 2020
    Review
  12. Loss of DNA polymerase β induces cellular senescence.Environmental and molecular mutagenesis · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Review
  19. Article
  20. Genetic predispositions to childhood leukemia.Therapeutic advances in hematology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Diane C CabelofDepartment of Nutrition and Food Science, Wayne State University, Detroit, MI, USA.
Hiral V Patel
Qing Chen
Holly van Remmen
Larry H Matherly
Yubin Ge
Jeffrey W Taub
The Barbara Ann Karmanos Cancer Institute · USWayne State University · USThe University of Texas Health Science Center at San Antonio · US

Funding

RESEARCH CORE-- SIGNAL TRANSDUCTIONP30ES006639 · NIEHS · WAYNE STATE UNIVERSITY · PI DERESKI, MARY O · 1994 to 2008
$13.1M
Molecular and Pharmacologic Correletes of Acute Myeloid Leukemia in Down SyndromeR01CA120772 · NCI · WAYNE STATE UNIVERSITY · PI TAUB, JEFFREY WARREN · 2007 to 2011
$2.1M
Cystathionine B Synthase and ARA C Therapy for LeukemiaR01CA092308 · NCI · WAYNE STATE UNIVERSITY · PI TAUB, JEFFREY WARREN · 2001 to 2005
$1.2M
NCI NIH HHS R01 CA092308NCI NIH HHS R01 CA120772NCI NIH HHS R01-CA120772NCI NIH HHS R01-CA92308NIEHS NIH HHS P30 ES006639NIEHS NIH HHS P30 ES06639
6 · The paper itself

Abstract

Down syndrome (DS) children have a unique genetic susceptibility to develop leukemia, in particular, acute megakaryocytic leukemia (AMkL) associated with somatic GATA1 mutations. The study of this genetic susceptibility with the use of DS as a model of leukemogenesis has broad applicability to the understanding of leukemia in children overall. On the basis of the role of GATA1 mutations in DS AMkL, we analyzed the mutational spectrum of GATA1 mutations to begin elucidating possible mechanisms by which these sequence alterations arise. Mutational analysis revealed a predominance of small insertion/deletion, duplication, and base substitution mutations, including G:C>T:A, G:C>A:T, and A:T>G:C. This mutational spectrum points to potential oxidative stress and aberrant folate metabolism secondary to genes on chromosome 21 (eg, cystathionine-beta-synthase, superoxide dismutase) as potential causes of GATA1 mutations. Furthermore, DNA repair capacity evaluated in DS and non-DS patient samples provided evidence that the base excision repair pathway is compromised in DS tissues, suggesting that inability to repair DNA damage also may play a critical role in the unique susceptibility of DS children to develop leukemia. A model of leukemogenesis in DS is proposed in which mutagenesis is driven by cystathionine-beta-synthase overexpression and altered folate homeostasis that becomes fixed as the ability to repair DNA damage is compromised.

Indexed as

Base SequenceCell Transformation, NeoplasticChildCystathionine beta-SynthaseDNA Mutational AnalysisDown SyndromeFemaleFetusGATA1 Transcription FactorGene DeletionGene DuplicationGenetic Predisposition to DiseaseHumansLeukemia, Megakaryoblastic, AcuteMaleMolecular Sequence DataCystathionine beta-SynthaseGATA1 protein, humanGATA1 Transcription Factor

Identifiers

PMID19633202
PMCPMC2756130
OpenAlexW1992270659

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.