ArticleBioinformatics (Oxford, England)2009
A System for Information Management in BioMedical Studies--SIMBioMS.
Article in Bioinformatics (Oxford, England), 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 4 of them syntheses that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
16 citing papers in PubMed, 4 syntheses or guidelines pooled it.
- GWAS on longitudinal growth traits reveals different genetic factors influencing infant, child, and adult BMI.Science advances · 2019Pooled it
- Genome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity.Human molecular genetics · 2013Pooled it
- Common variants at 12q15 and 12q24 are associated with infant head circumference.Nature genetics · 2012Pooled it
- Variants in ADCY5 and near CCNL1 are associated with fetal growth and birth weight.Nature genetics · 2010Pooled it
- Genome-wide association study of offspring birth weight in 86 577 women identifies five novel loci and highlights maternal genetic effects that are independent of fetal genetics.Human molecular genetics · 2018Article
- Neuroimaging, Genetics, and Clinical Data Sharing in Python Using the CubicWeb Framework.Frontiers in neuroinformatics · 2017Article
- Improving uptake of screening for colorectal cancer: a study on invitation strategies and different test kit use.European journal of gastroenterology & hepatology · 2015Article
- Efficient sample tracking with OpenLabFramework.Scientific reports · 2014Article
- Biomarkers in autism spectrum disorder: the old and the new.Psychopharmacology · 2014Review
- A digital repository with an extensible data model for biobanking and genomic analysis management.BMC genomics · 2014Article
- Reuse of public genome-wide gene expression data.Nature reviews. Genetics · 2013Review
- New loci associated with birth weight identify genetic links between intrauterine growth and adult height and metabolism.Nature genetics · 2013Article
- LabKey Server: an open source platform for scientific data integration, analysis and collaboration.BMC bioinformatics · 2011Article
- ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level.Bioinformatics (Oxford, England) · 2010Article
- Sequence variants at CHRNB3-CHRNA6 and CYP2A6 affect smoking behavior.Nature genetics · 2010Article
- BioTorrents: a file sharing service for scientific data.PloS one · 2010Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
16 authors.
Funding
Abstract
unlabelledSIMBioMS is a web-based open source software system for managing data and information in biomedical studies. It provides a solution for the collection, storage, management and retrieval of information about research subjects and biomedical samples, as well as experimental data obtained using a range of high-throughput technologies, including gene expression, genotyping, proteomics and metabonomics. The system can easily be customized and has proven to be successful in several large-scale multi-site collaborative projects. It is compatible with emerging functional genomics data standards and provides data import and export in accepted standard formats. Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented. AVAILABILITY: The source code, documentation and initialization scripts are available at http://simbioms.org.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.