Evidence map›Paper›PMID 19631652›Full record

ArticleInternational journal for parasitology2010

Functional analysis of putative operons in Brugia malayi.

Canhui Liu, Ana Oliveira, Chitra Chauhan, Elodie Ghedin, Thomas R Unnasch

Abstract read
In one paragraph

Article in International journal for parasitology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Canhui LiuGlobal Health Infectious Disease Research Program, Department of Global Health, University of South Florida, Tampa, FL 33612, USA.
Ana Oliveira
Chitra Chauhan
Elodie Ghedin
Thomas R Unnasch
University of South Florida · USUniversity of Alabama at Birmingham · USUniversity of Pittsburgh · US

Funding

Transfection and analysis of transcription in B. malayiR01AI048562 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI UNNASCH, THOMAS R · 2001 to 2009
$2.7M
NIAID NIH HHS R01 AI048562NIAID NIH HHS R01AI048562
6 · The paper itself

Abstract

Operons are a common mode of gene organization in Caenorhabditis elegans. Similar gene arrangements suggest that functional operons may exist in Brugia malayi. To definitively test this hypothesis, a bicistronic reporter vector consisting of an upstream firefly luciferase gene and a downstream renilla luciferase gene was constructed. The genome was then surveyed to identify 15 gene pairs that were likely to represent operons. Two of four domains upstream of the 5' gene from these clusters exhibited promoter activity. When constructs replicating the promoter and intergenic arrangement found in the native putative operon were transfected into embryos, both firefly and renilla activities were detected, while constructs with the promoter alone or intergenic region alone produced no activity from the downstream reporter. These data confirm that functional operons exist in B. malayi. Mutation of three U-rich element homologues present in one of the operons resulted in a decrease in downstream renilla reporter activity, suggesting that these were important in mRNA maturation. Hemi-nested reverse transcriptase-PCR assays demonstrated that while the mRNA encoding the native downstream open reading frame of one operon contained an SL1 spliced leader at its 5' end, the renilla gene mRNA produced from the corresponding transgenic construct did not.

Indexed as

GenomeMultigene FamilyOperonAnimalsBrugia malayiFilariasisGenes, ReporterHelminth ProteinsLuciferasesPolymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTransfectionTrans-SplicingHelminth ProteinsLuciferasesRNA, Messenger

Identifiers

PMID19631652
PMCPMC2813416
OpenAlexW2024869809

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.