Evidence map›Paper›PMID 19627586›Full record

ArticleVirology journal2009

Molecular epidemiology of sexually transmitted human papillomavirus in a self referred group of women in Ireland.

John F Menton, Suzanne M Cremin, Lydie Canier, Mary Horgan, Liam J Fanning

Abstract read
In one paragraph

Article in Virology journal, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Role of genomic and proteomic tools in the study of host-virus interactions and virus evolution.Indian journal of virology : an official organ of Indian Virological Society · 2013
    Article
  4. Article
  5. Article
  6. Review
  7. Diversity and uncommon HPV types in HIV seropositive and seronegative women attending an STI clinic.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John F MentonMolecular Virology Research and Diagnostic Laboratory, Department of Medicine, Cork University Hospital & University College Cork, Cork, Ireland.j.menton@ucc.ie
Suzanne M Cremin
Lydie Canier
Mary Horgan
Liam J Fanning

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman papillomavirus (HPV) causes cervical cancer and external genital warts. The purpose of this study is to document the genotype distribution of HPV in females aged between 18 and 34 who self-referred to an STI clinic with visible external genital warts (EGW). Scrapings were taken from visible external genital warts (EGW). These scrapings were analysed by PCR for the presence of HPV DNA. Positive samples were then genotyped by means of a commercially available assay (LiPA). A comparison of genotyping results determined by the LiPA assay and direct amplicon DNA sequencing was also performed.

resultsNinety-two patients out of 105 samples (88%) had detectable levels of HPV DNA. The majority of individuals with EGW (66%) showed the presence of two or more genotypes. The most common HPV genotypes present in the study population were HPV-6, HPV-11, HPV-16, HPV-18, HPV-33 and HPV-53. Potential effects of vaccination on HPV molecular epidemiology indicate that 40% of the patients could have been protected from the high risk genotypes HPV-16 and HPV-18.

conclusionThis is the first report of the molecular epidemiology of external genital warts in women aged between 18 and 34 from Ireland based on results from a LiPA assay. The study shows that most individuals are infected with multiple genotypes including those with high oncogenic potential and that the newly available HPV vaccines could have a significant impact on prevalence of the most common HPV genotypes in this study population.

Indexed as

AdultCluster AnalysisCondylomata AcuminataDNA, ViralFemaleGenotypeHumansIrelandMolecular EpidemiologyMolecular Sequence DataPapillomaviridaePapillomavirus InfectionsPhylogenySequence HomologySexually Transmitted Diseases, ViralYoung AdultDNA, Viral

Identifiers

PMID19627586
PMCPMC2724505

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.