Evidence map›Paper›PMID 19626039›Full record

ArticleGenes and immunity2009

Lack of replication of celiac disease risk variants reported in a Spanish population using an independent Spanish sample.

B Dema, A Martínez, M Fernández-Arquero, C Maluenda, I Polanco, E G de la Concha, E Urcelay, C Núñez

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

B DemaServicio de Inmunología Clínica, Hospital Clínico San Carlos, Madrid, Spain.
A Martínez
M Fernández-Arquero
C Maluenda
I Polanco
E G de la Concha
E Urcelay
C Núñez
Hospital Clínico San Carlos · ESHospital Universitario La Paz · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Celiac disease (CD) is an inflammatory condition affecting small bowel and triggered by gluten (or related proteins) ingestion in genetic susceptible individuals. Polymorphisms in three genes, SERPINE2, PPP6C and PBX3, have recently been associated with CD in the Spanish population. However, this association could not be replicated in the UK population using imputed data. As this second study analyzed a different population, we aimed at reevaluating the role of those polymorphisms using an independent Spanish sample. We genotyped three single nucleotide polymorphisms: rs6747096 in SERPINE2, rs458046 in PPP6C and rs7040561 in PBX3, in 417 CD patients, 527 ethnically matched healthy controls and parents of 304 CD patients. A case-control study using the chi(2)-test and a familial study using the transmission disequilibrium test were performed. No association was detected in those analyses. Therefore, our results seem to discard the role of the previously described polymorphisms in SERPINE2, PPP6C and PBX3 in CD susceptibility.

Indexed as

Genetic Predisposition to DiseaseAmyloid beta-Protein PrecursorCase-Control StudiesCeliac DiseaseGene FrequencyGenotypeHomeodomain ProteinsHumansPhosphoprotein PhosphatasesPolymorphism, Single NucleotideProtease NexinsProto-Oncogene ProteinsReceptors, Cell SurfaceSerpin E2Amyloid beta-Protein PrecursorHomeodomain ProteinsPhosphoprotein PhosphatasesProtease Nexinsprotein phosphatase 6proto-oncogene protein Pbx3Proto-Oncogene ProteinsReceptors, Cell SurfaceSerpin E2SERPINE2 protein, human

Identifiers

PMID19626039
OpenAlexW1992930602

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.