Evidence map›Paper›PMID 19624863›Full record

ArticleBMC genomics2009

The odorant binding protein gene family from the genome of silkworm, Bombyx mori.

Da-Ping Gong, Hui-Jie Zhang, Ping Zhao, Qing-You Xia, Zhong-Huai Xiang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2009. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 265 citations in OpenAlex.

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  8. Male-derived PBP4 is essential for sperm competition by mediating sperm motility in moths.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  19. Odorant-Binding Proteins and Chemosensory Proteins inInternational journal of molecular sciences · 2023
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62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Da-Ping GongThe Key Sericultural Laboratory of Agricultural Ministry, Southwest University, Chongqing, PR China. gongdaping@163.com
Hui-Jie Zhang
Ping Zhao
Qing-You Xia
Zhong-Huai Xiang
Southwest University · CNChongqing University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChemosensory systems play key roles in the survival and reproductive success of insects. Insect chemoreception is mediated by two large and diverse gene superfamilies, chemoreceptors and odorant binding proteins (OBPs). OBPs are believed to transport hydrophobic odorants from the environment to the olfactory receptors.

resultsWe identified a family of OBP-like genes in the silkworm genome and characterized their expression using oligonucleotide microarrays. A total of forty-four OBP genes were annotated, a number comparable to the 57 OBPs known from Anopheles gambiae and 51 from Drosophila melanogaster. As seen in other fully sequenced insect genomes, most silkworm OBP genes are present in large clusters. We defined six subfamilies of OBPs, each of which shows lineage-specific expansion and diversification. EST data and OBP expression profiles from multiple larvae tissues of day three fifth instars demonstrated that many OBPs are expressed in chemosensory-specific tissues although some OBPs are expressed ubiquitously and others exclusively in non-chemosensory tissues. Some atypical OBPs are expressed throughout development. These results reveal that, although many OBPs are chemosensory-specific, others may have more general physiological roles.

conclusionSilkworms possess a number of OBPs genes similar to other insects. Their expression profiles suggest that many OBPs may be involved in olfaction and gustation as well as general carriers of hydrophobic molecules. The expansion of OBP gene subfamilies and sequence divergence indicate that the silkworm OBP family acquired functional diversity concurrently with functional constraints. Further investigation of the OBPs of the silkworm could give insights in the roles of OBPs in chemoreception.

Indexed as

Multigene FamilyAmino Acid SequenceAnimalsBombyxExpressed Sequence TagsGene Expression ProfilingGenes, InsectGenome, InsectInsect ProteinsLarvaMolecular Sequence DataOligonucleotide Array Sequence AnalysisPhylogenyReceptors, OdorantSequence AlignmentInsect Proteinsodorant-binding proteinReceptors, Odorant

Identifiers

PMID19624863
PMCPMC2722677
OpenAlexW2161019186

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.